Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61254g00002 ATGGCGAAGGAGCAAATGCAAGTTCTGAATGCACTTGATGTGGCAAAAACACAATGGTACCATTTCACTGCAATAGTCATAGCTGGAATGGGGTTCTTCACCGATGCATACGATCTATTCTGCATATCCCTTGTGACAAAGTTGCTAGGGCGCATATACTACCACGTTGATGGTGCGGAAAAGCCTGGCACATTGCCTCCTAACGTAGCAGCTGCTGTAAATGGTGTAGCTTTCTGTGGAACACTTTCAGGACAACTCTTCTTCGGATGGCTTGGAGATAAGTTAGGCCGAAAAAAGGTCTATGGCATGACTCTGATGATGATGGTAATATGCTCCATTGGTTCAGGCCTTTCCTTTGGTCATAGTCCGAAATCCGTGATGGCAACTCTCTGCTTCTTCCGGTTTTGGCTTGGTTTCGGTATCGGTGGAGATTATCCCCTTTCTGCTACCATTATGTCCGAGTATTCTAACAAGAAGACTCGTGGTGCTTTCATTGCCGCGGTCTTTGCTATGCAAGGTTTTGGAATCTTGGCAGGTGGTATATTTGCAATCATAATTTCAGCTGCATTCAGAGAAAGGTTCAGTGCCGCACCCTATGAGGTTGATCCAGTTGGTTCAACTGTTCCACAAGCAGATTATGTTTGGAGAATAATTGTGATAGTTGGAGCGCTCCCGGCTGCATTGACTTATTATTGGCGTATGAAGATGCCGGAAACTGCCCGTTACACTGCCTTAGTTGCAAAGAATCAAGAGCAGGCTGCCGCAGATATGTCTAAGGTTCTGCAGGTGGAGATTCAAGCTGAGCCAAGGAAGGAGGGGCAGGAAAAGGCTAAATACTCCTTGTTCTCAAAGGAGTTCCTTAGTCGCCATGGTCTACATCTGCTGGGCACAACAACAACATGGTTCTTGCTTGACATTGCATTTTACAGCCAGAATCTTTTCCAAAAGGATATCTTCAGCGCAGTTGGTTGGATCCCTCCTGCAAAAACCATGAATGCTCTTGAGGAGGTTTACAGAATTGCAAGGGCTCAAACACTTATTGCTCTTTGCAGTACAGTTCCGGGATATTGGTTTACAGTGGCTTTCATTGACAAGATTGGAAGATTCGCCATCCAGTTGATGGGGTTCTTCTTTATGACTGTCTTCATGTTCGCTCTCGCCATTCCTTACGACCACTGGACACACAAGGAGAACCGCATTGGATTTGTGGTGATGTATTCCTTAACCTTCTTCTTCGCAAATTTCGGGCCTAATGCCACCACATTTGTAGTGCCGGCAGAGATTTTCCCTGCTAGGTTCCGGTCTACATGCCATGGGATATCATCGGCATCCGGGAAGCTCGGTGCTATCGTTGGAGCATTTGGGTTCTTGTATTTGGCACAAAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTAAAGAATGCACTGATTCTGTTAGGCGTAGTTAATATTTTAGGCTTCTTCTTTACATTCTTGGTGCCTGAGGCAAAGGGAAAATCTTTGGAGGAGATGTCAGGTGAGAATGAAGAGGAAGAAGTACCACCGGAACTATCAGAACAGCAACGTTCTTATAGCAACAGAACTGTTCCATATGTTTAG 1617 0.4564 MAKEQMQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPNVAAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGMTLMMMVICSIGSGLSFGHSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISAAFRERFSAAPYEVDPVGSTVPQADYVWRIIVIVGALPAALTYYWRMKMPETARYTALVAKNQEQAAADMSKVLQVEIQAEPRKEGQEKAKYSLFSKEFLSRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFSAVGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNALILLGVVNILGFFFTFLVPEAKGKSLEEMSGENEEEEVPPELSEQQRSYSNRTVPYV 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61254g00002 538 MobiDBLite consensus disorder prediction 508 538 - -
Stsc61254g00002 538 MobiDBLite consensus disorder prediction 524 538 - -
Stsc61254g00002 538 Pfam Sugar (and other) transporter 25 511 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc61254g00002 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
Stsc61254g00002 538 NCBIfam phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016020
Stsc61254g00002 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 502 - -
Stsc61254g00002 538 Gene3D MFS general substrate transporter like domains 20 527 IPR036259 -
Stsc61254g00002 538 FunFam Inorganic phosphate transporter 1-6 20 524 - -
Stsc61254g00002 538 CDD MFS_PhT 25 503 - -
Stsc61254g00002 538 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61254g00002 Stsc-Chr61254 5055 7695 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61254g00002 1 518 Inorganic Solute Cotransporters AT3G54700 83.784 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61254g00002 K08176 - gmx:100803626 932.554