Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61240g00004 ATGGCTACTCATAAAGAAAATGGCAGATACAATCACAAATTGGAAGCATGGAGGTCAGCCTTGTCTGAAGTAGGCAAGATTTATGGGCAACGCTGTGATCAGAATACACCATGGGCTACGGCTATTGACAATATTGTTGAAGAGGTCTCAAAAAGACTTCCTCCTGAGCTTCTGTATATTGACCATCCACTTGAGTTTGATTTTGAACTTGAAGATGTGAAATTGCGTTTAGAGATTGATTTTCATTCTACCCGTTTCATACTGGGAATTCATGGAGATGGTGAACTAAGAAAATTTGTTGTGGAACTTGAGAAAACAAATGCAAGCGGTGGTGGCCTAGAAGAACTACAGAAAACGCTTCTTTTTGAGATGAGAGAGGAGGTAAAGACTAAGAGTGGAAGCACATTCAAAGAATCCTCTGGAATAAGAAGAAGACTAGGTCAAAAAAGAGTTCTTCTGGTTTTGGATGATGTTGATAGCATACAGCAACTGAATTCACTAGTCGGAGGAATTGATTGGTTTGGTTCTGGTAGTAGGATCATTATAACAAGAAATGAAGATGTGTTAGATGAGCATGTGCTAAATAATGGTTTTGAGACTAAGAAATATTGTATTATAGGTAGACAGGTTGAGGAAGATGATTTAGACAAAGGAGATCTAGTGGGCTTTACGAATAACTTTTGCTTTGTAATTAAGCAGTTGCATGATGCAAACGTTAATGTTGTCTCCATCATTGGCATGGGTGGGTTGGGCAAAACTACCCTTGCTCAAAAGGTCTATGAAAACAATGAGATCAAAAATTTGTTCCCCTGCCGTGGATGGAGTCGTGTTTCCAAAGATTAG 843 0.3891 MATHKENGRYNHKLEAWRSALSEVGKIYGQRCDQNTPWATAIDNIVEEVSKRLPPELLYIDHPLEFDFELEDVKLRLEIDFHSTRFILGIHGDGELRKFVVELEKTNASGGGLEELQKTLLFEMREEVKTKSGSTFKESSGIRRRLGQKRVLLVLDDVDSIQQLNSLVGGIDWFGSGSRIIITRNEDVLDEHVLNNGFETKKYCIIGRQVEEDDLDKGDLVGFTNNFCFVIKQLHDANVNVVSIIGMGGLGKTTLAQKVYENNEIKNLFPCRGWSRVSKD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61240g00004 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 279 IPR027417 -
Stsc61240g00004 280 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 197 IPR027417 -
Stsc61240g00004 280 Pfam NB-ARC domain 230 279 IPR002182 GO:0043531
Stsc61240g00004 280 Gene3D - 95 195 IPR027417 -
Stsc61240g00004 280 Gene3D - 224 280 IPR027417 -
Stsc61240g00004 280 Gene3D - 1 59 IPR035897 -
Stsc61240g00004 280 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 189 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61240g00004 Stsc-Chr61240 22158 24215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61240g00004 132 183 WRKY Transcription Factor Family AT5G45050 51.923 5.14e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61240g00004 - - adu:110280616 362.844