Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61232g00002 ATGCTTTCTCCAATAGATATATTTGTCACTACGGTGGATCCAGTGAAGGAACCTCCTCTAGTTACTGCAAATACAGTTCTTTCAATCTTGGCTTTGGATTACCCAGCGGACAAAATCTCATGCTACGTTTCTGATGATGGAGCTTCCATGCTAACCTTTGAAGCTCTTCAAGAAACCGCTGAATTCGCACGAAAATGGGTACCGTTCTGCAGAAAATACTCCGCTGAACCTCGAGCACCAGAGAAGTACTTCTCTGAGAAGATAGATTATATTAAGGATAAGCTTCAGCCTACATATGTAAAAGAACGTCGTACTATGAAGAGAGAATATGAAGAATTTAAGGTGAGGATTAATGCACTTGTGGCTAAGTCCATGAGAGTTCCTCCAGAAGGGTGGACAATGAAAGATGAGACACCATGGCCGGGAAACAACACCAGCGATCATCCAAGTATGATACAAGTCCTTCTTGCTCGAGGCGGAGGCAACCACCCCGACCAACTTCCCTGTCTTGTATACATATCCCGTGAGAAAAGGCCCGCATTCCAACACCACAACAAAGCTGGTGCCATAAATGCCTTGCTTCGCGTATCAGCAGTGCTAAGCAATGCTCCCTTCGTGCTGAACTTGGATTGCAATCATTATGTTAATAACAGCAAAGTGGTGCGTGAGGCCATGTGTTTCTTTATGGACATCCAACTTGGGAATGGCATTGGCTTTGTTCAGTTTCCTTTAAGATTTGACAGCCTTGACAGGAACGATCGTTATGCCAACAAAAACACTGTTTTGTTTGATATTAACCTGAGGTGCCTAGATGGAATTCAAGGACCTGTTTATGTTGGTTCAGCATGCATCTTTAGAAGGAAAGCAATATATGGTTTCGAACCACCAAAGGTGTCAAAACCGCCGCGAATTGTTCAAGTGCACTCAAAACAGGATGAAAATGAAGAGGAGGATGCAGGAATAACAGAGGAAGATAAGCAGCTACTGAAATCAGAGATGAACTTTGAGAACAAATTTGGAAAATCATCACCTTTTGTTAATCCTTCATCAACAGAAGAAGAAGAAGGTGGTGTTGATGCTTCTTCCGGTCAGGCAGCCCTGCTCAAAGAAGCCATTCATGTCATGAGCTGTAAATATGAAGACAGAACTCTATGGGGACATGAGGTTGGAATGAGCTATGGATCTGTAGCTGCAGATACTCTTACAAGTTTCAAGTTGCATAGTCGCGGCTGGAAATCGGTATACTGTATGCCGGAGAGAGCTGCATTCAGGGGGACAGCTCCTATCAACCTTACAGATAGACTTAACCAGGTGCTTAGATGGGCAGTTGGATCACTTGAGATCCTCTTCAGCCGCCATTGCCCGTTGTGGTATCACTTCAAGGAAGGAAAACTGAAGCTGCTACAAAGGATTGCCTATATAAACAGCACTGTCTACCCCTTCAGCTCCATACCCCTTTTGATATATTGTCTCATTCCTGCTATCTGCTTGCTCACTGATAAATTCATCACACCTTCGGTTGGGACATTCGCTAGTCTAGTCTTTATTAGTCTATTCATCACCATCTTTGCCTCGGCCATTCTCGAATTGAGATGGAGTGGTGTTAGCCTTGAGGAATGGTGGAGGAATCAGCAATTCTGGGTCATCGGAAGCGTGTCCGCACACATCTTCGCCGTCGTACACTGCCTAACGAAAGCCATCCCCCTGGCAAGAAGCAATATCAACTTCACCACCGTCTCGAAGGCGCCGGACGAAGGGCAGTTCAACCAGCTATACACCATTAAATGGACTGCTCTGCTTATACCTCCAACTACAATAATCATAATCAATCTTATTGGCATTGTGGCTGGTTTCACAGATGCTGTAAACAGTGGTGAACATTCTTGGGGAGCACTTATTGGGAAGCTCTTCTTCTCATTGTGGGTTATTGTCCATTTGTATCCATTCCTAAAAGGCCTCATGGGCAGGCAGAACAGAACACCAACACTAATAGTCATATGGTCTGTGCTGTTGGCTTCTATCTTCTCCTTGGTTTGGGTAAGGATTGACCCTTTTGTGTTGAAAACAAAAGGTCCAGACGCTAAGCAATGTGGAATCAGTTGTTGA 2106 0.4444 MLSPIDIFVTTVDPVKEPPLVTANTVLSILALDYPADKISCYVSDDGASMLTFEALQETAEFARKWVPFCRKYSAEPRAPEKYFSEKIDYIKDKLQPTYVKERRTMKREYEEFKVRINALVAKSMRVPPEGWTMKDETPWPGNNTSDHPSMIQVLLARGGGNHPDQLPCLVYISREKRPAFQHHNKAGAINALLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDIQLGNGIGFVQFPLRFDSLDRNDRYANKNTVLFDINLRCLDGIQGPVYVGSACIFRRKAIYGFEPPKVSKPPRIVQVHSKQDENEEEDAGITEEDKQLLKSEMNFENKFGKSSPFVNPSSTEEEEGGVDASSGQAALLKEAIHVMSCKYEDRTLWGHEVGMSYGSVAADTLTSFKLHSRGWKSVYCMPERAAFRGTAPINLTDRLNQVLRWAVGSLEILFSRHCPLWYHFKEGKLKLLQRIAYINSTVYPFSSIPLLIYCLIPAICLLTDKFITPSVGTFASLVFISLFITIFASAILELRWSGVSLEEWWRNQQFWVIGSVSAHIFAVVHCLTKAIPLARSNINFTTVSKAPDEGQFNQLYTIKWTALLIPPTTIIIINLIGIVAGFTDAVNSGEHSWGALIGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRIDPFVLKTKGPDAKQCGISC 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61232g00002 701 Coils Coil 103 123 - -
Stsc61232g00002 701 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 668 - -
Stsc61232g00002 701 SUPERFAMILY Nucleotide-diphospho-sugar transferases 14 512 IPR029044 -
Stsc61232g00002 701 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 154 294 IPR029044 -
Stsc61232g00002 701 Pfam Cellulose synthase 5 303 IPR005150 GO:0016020|GO:0016760|GO:0030244
Stsc61232g00002 701 Pfam Cellulose synthase 310 695 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61232g00002 Stsc-Chr61232 19346 23162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61232g00002 1 701 Cell Wall Biosynthesis AT5G17420 68.245 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61232g00002 K10999 - gmx:100777270 1190.25