Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61225g00005 ATGGCAGAAGTCATAGCAGAAACAAGAACCAATTCCTCTTCACGAAGACATGGAGGAGGAGATGATACTCCTTCTCTGCCATACATGCACAAAGTGGGAGCTCCTCCTAAGCAGACACTCTTCCAAGAGATCAAGCATTCTTTCAATGAGACTTTCTTCCCTGACAAGCCCTTTGGCAACTTCAAGGACCAATCTGGATCCAGAAAGTTTGTTCTTGGACTCCAATATATCTTCCCTATTCTTGAATGGGGAAGACATTATGATCTCAAGAAATTCAGGGGTGATTTCATTGCTGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGACCTTGCATATGCAAAGCTTGCAAATTTGGATCCTTGGTATGGACTATACTCAAGCTTTGTGGCACCTCTTGTGTATGCTTTCATGGGAACCTCAAGAGATATTGCCATAGGACCTGTGGCTGTGGTGTCCCTCTTGCTTGGGACTTTGCTTTCCAATGAGATCAGTAACACCAAAAGCCATGACTACCTGCGCCTTGCATTCACTGCTACCTTCTTTGCAGGAGTCACTCAAATGCTACTTGGAGTTTGCAGGCTTGGATTCTTGATAGATTTCCTATCTCATGCTGCCATTGTTGGGTTCATGGCTGGAGCTGCCATTACAATTGGACTGCAACAGCTTAAAGGTCTGCTTGGCATAAAGGACTTCACCAAGAATAGTGATATTGTTTCTGTAATGCACTCGGTTTGGAGCAATGTGCACCATGGGTGGAATTGGGAGACTATACTCATTGGACTATCATTCTTGATCTTCCTTCTTATAACCAAGTATATTGCTAAAAAGAACAAGAAACTCTTCTGGGTGTCTGCAATTTCTCCTATGATCTGTGTTATAGTGTCTACATTTTTTGTGTACATTACCAGAGCAGACAAGAGAGGCGTGACGATCGTGAAACATATCAAAAGCGGTGTGAACCCATCATCTGCTAATGAAATCTTCTTCCATGGAAAATATCTAGGAGCTGGTGTTAGAGTTGGTGTTGTAGCTGGCTTGGTAGCACTCACTGAAGCTATGGCAATTGGGAGAACATTTGCTGCAATGAAAGACTATTCAATTGATGGTAACAAAGAAATGGTGGCAATGGGAACAATGAACATTGTTGGTTCTTTAACATCATGTTATGTGACAACAGGATCATTTTCTCGGTCAGCAGTGAACTACATGGCTGGTTGTAAAACTGCTGTATCCAACATTGTCATGGCCATTGTTGTGTTACTAACTCTTCTGGTCATCACACCACTCTTTAAGTACACTCCAAATGCAGTCCTTGCTTCCATTATCATAGCTGCTGTTGTAAACCTGGTGAACATTGAAGCAATGGTTCTGCTCTGGAAGATTGACAAATTCGATTTCGTTGCTTGCATGGGAGCATTCTTTGGTGTCATCTTCAAGAGTGTTGAAATCGGCCTTCTAATCGCAGTGGCGATTTCGTTTGCCAAGATACTTTTACAAGTGACAAGGCCAAGAACTGCAGTTCTTGGGAAGCTTCCTGGGACTAGTGTTTATAGGAACATCCAGCAATACCCCAAAGCAGAACAGATTCCTGGGATGCTCATTATCAGGGTTGATTCTGCTATCTACTTCTCAAATTCCAACTATATCAAGGAGAGAATATTGAGATGGCTGATTGATGAAGGTGCTCAAAGGACAGAAAGTGAATTACCAGAAATACAGCATCTGATTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGCATCCATGCCTTTGAAGAATTATACAAGACCCTTCAGAAAAGAGAAGTTCAGCTCATGTTGGCTAATCCGGGGCCAGTTGTAATAGAGAAGCTGCATGCATCAAACTTAGCAGAATTAATTGGAGAAGATAAAATATTTCTCACAGTGGCTGATGCTGTTGCAACTTATGGTCCAAAGACTGCAGCATTCTGA 1962 0.423 MAEVIAETRTNSSSRRHGGGDDTPSLPYMHKVGAPPKQTLFQEIKHSFNETFFPDKPFGNFKDQSGSRKFVLGLQYIFPILEWGRHYDLKKFRGDFIAGLTIASLCIPQDLAYAKLANLDPWYGLYSSFVAPLVYAFMGTSRDIAIGPVAVVSLLLGTLLSNEISNTKSHDYLRLAFTATFFAGVTQMLLGVCRLGFLIDFLSHAAIVGFMAGAAITIGLQQLKGLLGIKDFTKNSDIVSVMHSVWSNVHHGWNWETILIGLSFLIFLLITKYIAKKNKKLFWVSAISPMICVIVSTFFVYITRADKRGVTIVKHIKSGVNPSSANEIFFHGKYLGAGVRVGVVAGLVALTEAMAIGRTFAAMKDYSIDGNKEMVAMGTMNIVGSLTSCYVTTGSFSRSAVNYMAGCKTAVSNIVMAIVVLLTLLVITPLFKYTPNAVLASIIIAAVVNLVNIEAMVLLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTSVYRNIQQYPKAEQIPGMLIIRVDSAIYFSNSNYIKERILRWLIDEGAQRTESELPEIQHLIVEMSPVTDIDTSGIHAFEELYKTLQKREVQLMLANPGPVVIEKLHASNLAELIGEDKIFLTVADAVATYGPKTAAF 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61225g00005 653 MobiDBLite consensus disorder prediction 1 26 - -
Stsc61225g00005 653 FunFam Sulfate transporter 31 503 649 - -
Stsc61225g00005 653 Pfam STAS domain 524 642 IPR002645 -
Stsc61225g00005 653 Gene3D STAS domain 503 648 IPR036513 -
Stsc61225g00005 653 NCBIfam sulfate permease 79 642 IPR001902 GO:0016020|GO:0055085
Stsc61225g00005 653 ProSiteProfiles STAS domain profile. 523 646 IPR002645 -
Stsc61225g00005 653 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Stsc61225g00005 653 Pfam Sulfate permease family 92 471 IPR011547 GO:0016020
Stsc61225g00005 653 PANTHER SULFATE TRANSPORTER 38 645 IPR001902 GO:0016020|GO:0055085
Stsc61225g00005 653 CDD STAS_SulP_like_sulfate_transporter 524 639 - -
Stsc61225g00005 653 MobiDBLite consensus disorder prediction 1 19 - -
Stsc61225g00005 653 SUPERFAMILY SpoIIaa-like 525 646 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61225g00005 Stsc-Chr61225 5865 9219 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61225g00005 13 649 Inorganic Solute Cotransporters AT1G22150 71.385 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61225g00005 K17470 - gmx:100784124 1018.07