Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61225g00004 TGTTCTCCACTCTCACACACAAGAAGAAGAAGAAGAGGTGTGGTTTCGTGCAGTAGCAGCAGCAACTTGTACAACATGCTGTCACTGAGTCCCAAGAGTGCAACAATGGATGACATCAAGAAAGCATACAGATCAATGGCTCTAAGGTACCACCCTGATGTCTGCCATGACCCTTCCAAGAAAGATGAATCCACAAGGATATTCGTCCAGCTCAACAAAGCCTATGAGACCTTGTCTAATCCCACCCTCAAACAACAGTATGACCTTCAATTAGGGTTCATAACCTCCAGAAAGAGGTGGCAGGAGCAGCTGCTTGAATTGAAGACAAGGTCCCATACAAAACAGGGTTCATCACCTTCATCATGGGGCAGCAGAATGAGGGCACAAAACGTTACCATCATCATGAACAACCACAACTAG 420 0.4595 CSPLSHTRRRRRGVVSCSSSSNLYNMLSLSPKSATMDDIKKAYRSMALRYHPDVCHDPSKKDESTRIFVQLNKAYETLSNPTLKQQYDLQLGFITSRKRWQEQLLELKTRSHTKQGSSPSSWGSRMRAQNVTIIMNNHN 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61225g00004 139 PRINTS DnaJ domain signature 25 43 IPR001623 -
Stsc61225g00004 139 PRINTS DnaJ domain signature 63 83 IPR001623 -
Stsc61225g00004 139 PRINTS DnaJ domain signature 43 58 IPR001623 -
Stsc61225g00004 139 MobiDBLite consensus disorder prediction 110 128 - -
Stsc61225g00004 139 Pfam DnaJ domain 22 88 IPR001623 -
Stsc61225g00004 139 SUPERFAMILY Chaperone J-domain 17 91 IPR036869 -
Stsc61225g00004 139 MobiDBLite consensus disorder prediction 109 128 - -
Stsc61225g00004 139 SMART dnaj_3 21 83 IPR001623 -
Stsc61225g00004 139 ProSitePatterns Nt-dnaJ domain signature. 68 87 IPR018253 -
Stsc61225g00004 139 Gene3D DnaJ domain 13 115 IPR036869 -
Stsc61225g00004 139 CDD DnaJ 22 80 IPR001623 -
Stsc61225g00004 139 ProSiteProfiles dnaJ domain profile. 22 91 IPR001623 -
Stsc61225g00004 139 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 18 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61225g00004 Stsc-Chr61225 883 1302 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61225g00004 22 97 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.975 4.81e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61225g00004 - - gmx:100783590 150.214