Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61225g00001 ATGAAGATGAAGCCTTTTGGTACATTAATGTCAATGGCAGACAACTATTCGTTAAGGAAATATAAAGGCAAAACCAAAACCAGAAAGTTTTGTCTGTTCCTCCAATCTCTGTTCCCTATCCTTGACTGGGGAAGACACTACACTTTCACAAACTTTAGAGGTGATTTCATTTCTGGACTCACCACTGCAGCTCTCTGCATTCCTCAGGATATTGCATATGCCAAGCTTGCAAATTTGGACCCTCACCATGCACTATATGCAAGCTTTGTGACACCTCTTGTGTACGCTGCCATGGGAAGCTCAAGAGACATTGCCATTGGACCTGCAGCTGTGGTCACACTCTTGCTTGGAGCTATGATTTCTAAAGAGATTAGAGACCACAAGAGCCATGAATATCTTCGTCTCGCTTTCACTGCTACCTTCTTTGCTGGAATCACTCAGCTCACACTCGGCCTTCTCAGGCTTGGTTTCTTGATTGACTTCTTATCTCATGCTGCCATTGTTGGATTCATGAGTGGAGCTGCCATCATTATCACACTTCAACAGCTTAAAGGCCTCCTTGGCATACCACACTTCACTAAGAAAACTGATATTATTTCTGGAATTGGATCAGTTAAGACTGCTATACTGCACCATGAGTGGAATTTGGAGACAATTATCATTGGAACATCATGCTTGGTCTTCCTTCTTCTTACCAAGTACATTGGTAAAAAGCGTAAGAAACTCTTCTGGGTAGCTGCAATTGCTCCTTTGACTTGTGTTATAGTGTCCACCATTTGTGTCTACATTACCAGGGCTGATGAGAGAGGCGTATTAACTGTTAGATACATCAAGGGAGGTCTCAACTCTGCTTCTGCTAATGAAATTTTCTTTAGAGGAAAATATCTTGTACCAGGTTTTCGGATTGGTGCAGTTGCTGGTATAGTAGCACTCACGGAAGCTGTGTCAATTGGGAGAACATTTGCAGCCATGAAACATTATACACTGGATGGTAACAAGGAAATGGTGGCAATGGGAACCATGAACGTTGTTGGTTCTCTCACATCTTGTATTGTGGCCACAGGATCTTTCTCTCGGTCAGCAGTGAACAACATGGCTGGTTGTGAAACAGCAGCATCAAACATAGTTATGTCCATTGTTATATTGCTAGTACTGACATTGATTACACCTGTGTTTAAGTACACTCCAAGTGCAGTGCTTTCTGCAATCATAATAGCAGCTGCAACAAACTTGGTGAACATCAATGCAGTTATTATGATATGGAAGATTGACAAATTTGACTTTATGGTTTGCATGGGAGCCTTCTTTGGTGTCATCTTCATTAATGTTGAATATTCCCTTCTAATTGCGGTGTCAATATCTGTTGTGAAAATAGTGTTGAGAGTGACAAGGCCAAAGGTTGTAGTACTTGGTAAAATTCCAGGTACTTCTATTTACAGGAACATTGAGCAATATCCTAAGGCATTTCAGATAACTGCCATGCTCATTCTCAGGGTTGATTCTGCTATCTACTTCACTAACTGCAACTTTATCAAGGACAGAATTCTGAGATGGTTGCATTATGAAAATGAAGAGAGGGCAGAATGTGATTTAGCCGAAATAGAGTATCTGGTTGTTGACATGTCAGCCGTTAGTGATATTGATTCAAGTGGCATCCGATCATTGGAAGGGTTATATCATAGCCTTGAGGAAAGACAAGTCCAGCTTGTGTTGGCAAACCTGGGGAAGATTGTAATGGAGAGGTTGCAGACATCAAAGTTAACAGACTTAATTGGAACAAATAAAATATTCCTCTCAGTTGCTGGTGCTGTTATTACTTATGGTCCTAAGAGGGAAGAACTCTAA 1845 0.4114 MKMKPFGTLMSMADNYSLRKYKGKTKTRKFCLFLQSLFPILDWGRHYTFTNFRGDFISGLTTAALCIPQDIAYAKLANLDPHHALYASFVTPLVYAAMGSSRDIAIGPAAVVTLLLGAMISKEIRDHKSHEYLRLAFTATFFAGITQLTLGLLRLGFLIDFLSHAAIVGFMSGAAIIITLQQLKGLLGIPHFTKKTDIISGIGSVKTAILHHEWNLETIIIGTSCLVFLLLTKYIGKKRKKLFWVAAIAPLTCVIVSTICVYITRADERGVLTVRYIKGGLNSASANEIFFRGKYLVPGFRIGAVAGIVALTEAVSIGRTFAAMKHYTLDGNKEMVAMGTMNVVGSLTSCIVATGSFSRSAVNNMAGCETAASNIVMSIVILLVLTLITPVFKYTPSAVLSAIIIAAATNLVNINAVIMIWKIDKFDFMVCMGAFFGVIFINVEYSLLIAVSISVVKIVLRVTRPKVVVLGKIPGTSIYRNIEQYPKAFQITAMLILRVDSAIYFTNCNFIKDRILRWLHYENEERAECDLAEIEYLVVDMSAVSDIDSSGIRSLEGLYHSLEERQVQLVLANLGKIVMERLQTSKLTDLIGTNKIFLSVAGAVITYGPKREEL 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61225g00001 614 NCBIfam sulfate permease 39 603 IPR001902 GO:0016020|GO:0055085
Stsc61225g00001 614 ProSiteProfiles STAS domain profile. 484 607 IPR002645 -
Stsc61225g00001 614 CDD STAS_SulP_like_sulfate_transporter 485 600 - -
Stsc61225g00001 614 PANTHER SULFATE TRANSPORTER 27 605 IPR001902 GO:0016020|GO:0055085
Stsc61225g00001 614 Pfam Sulfate permease family 52 432 IPR011547 GO:0016020
Stsc61225g00001 614 Pfam STAS domain 486 603 IPR002645 -
Stsc61225g00001 614 SUPERFAMILY SpoIIaa-like 490 604 IPR036513 -
Stsc61225g00001 614 FunFam Sulfate transporter 31 464 609 - -
Stsc61225g00001 614 Gene3D STAS domain 464 608 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61225g00001 Stsc-Chr61225 468 4442 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61225g00001 18 610 Inorganic Solute Cotransporters AT1G22150 62.626 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61225g00001 K17470 - gmx:100784124 781.556