Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61211g00002 ATGATTAGGAAGATATCATCATCTCAAGTTGTAAACTTGACTGAAACTTTGATGTCATTTACCAACACTTTGATATGTAGGGTTGCTTTGGGGAAAGATTATGGTAATGAGTACCATGTTGTTGATGAAGGATTAGGGTGTGGCCAAAGGAGCAAGTTGCAAGTGTTACTAAATGAGGCTCAAGCTTTGTTGGTTGAGTTTTACTTTTCAGATCATTTTCCATTGTTGGGGTGGGTTGATTGGCTTAGAGGAAAGCTTTGGAGGCTAGAGAAGAACTTCAAGGAATTTGACAAGTTCTATGAAAGAGTTATCTATGACCATATGAATATGAATAATAATAATAAGTCCAATGAGAAAAAAGTTCATGACATCATTGATATCTTTCTAGAGATGATGAATGATCACTCACTCCCCTTTGAGCTTAGTCTTGATAATATAAAAGCTGTGCTTATGAACATCTTTATAGCTGGAACAGATGCAAGTGCAGCTACAACAGTTTGGGCAATGAATGCACTCATGAAGAGTCCTAAATCCATGAAAAAGCTTCAAACTGAGATTAGAGGTTTATTTGGGGACAAAGATTTCATAAATGAAGATGACATTCAAAGGCTTCCATATCTCAAAGCAGTAATAAAAGAAACATTAAGAATGTTCCCACCATCACCACTACTCTTACCAAGAGAAACAATTGAAGAATGCAACATAGAAGGTTATGAAATTAAACCAAAAACTTTAGTGTATGTTAATGCATGGGCTATAGCAAGGGACCCCAAGAATTGGAAGGACCCAGAAGAGTTTTGTCCTGAAAGATTCATTGAGAATTCATCAATAGATGTTAGAGGGAATGATTTTGAGGTGATTCCATTTGGTAGTGGAAGAAGGATTTGCCCTGCTATGAACATGGGGTTGGTTACCATAGAAATTGCATTGGCAAATCTTGTTCACTCATTTGATTGGGATTTGCCAATTGGGTTTGACAAGGAAGAAATGTTTGATACGCAAGTGAAGCCAGGGATAACCATGCACAAGAAAAAGGATCTTTTTCTTGTGGCTAAGAAGCATGTAATGTAG 1071 0.3688 MIRKISSSQVVNLTETLMSFTNTLICRVALGKDYGNEYHVVDEGLGCGQRSKLQVLLNEAQALLVEFYFSDHFPLLGWVDWLRGKLWRLEKNFKEFDKFYERVIYDHMNMNNNNKSNEKKVHDIIDIFLEMMNDHSLPFELSLDNIKAVLMNIFIAGTDASAATTVWAMNALMKSPKSMKKLQTEIRGLFGDKDFINEDDIQRLPYLKAVIKETLRMFPPSPLLLPRETIEECNIEGYEIKPKTLVYVNAWAIARDPKNWKDPEEFCPERFIENSSIDVRGNDFEVIPFGSGRRICPAMNMGLVTIEIALANLVHSFDWDLPIGFDKEEMFDTQVKPGITMHKKKDLFLVAKKHVM 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61211g00002 356 PANTHER CYTOCHROME P450 71B11-RELATED 1 352 - -
Stsc61211g00002 356 FunFam Predicted protein 154 349 - -
Stsc61211g00002 356 PRINTS E-class P450 group I signature 286 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 PRINTS E-class P450 group I signature 145 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 PRINTS E-class P450 group I signature 20 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 PRINTS E-class P450 group I signature 249 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 PRINTS E-class P450 group I signature 165 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 PRINTS E-class P450 group I signature 296 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 PRINTS P450 superfamily signature 209 220 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 PRINTS P450 superfamily signature 156 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 PRINTS P450 superfamily signature 287 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 SUPERFAMILY Cytochrome P450 5 352 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 Gene3D Cytochrome P450 1 354 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 Pfam Cytochrome P450 4 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61211g00002 356 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 289 298 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61211g00002 Stsc-Chr61211 6605 8409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61211g00002 7 355 Cytochrome P450 AT4G31500 44.160 1.60e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61211g00002 - - aip:107646223 579.326