Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61210g00002 ATGGCTTCTTCAACTACCTTTAATCAATGGTTGAGTCTTGTGGGAATCATTTGGCTCCAAGCCATAAATGGAACAAACACAAACTTCCCAGCATACTCATCACAGCTAAAGCAACTCCTCTCAATCTCCCAAGTTCAACTGAACAACCTCGCTTTCGCCTCGGACGCCGGAAAACTCTTCGGCTTCTTCTCTGGCATGGCGGCGATTTACCTTCCCCTTTGGCTTGTTCTAATGATTGGAACAACACTTGGTTTGGTTGGCTATGGTGTTCAATACCTATTCACAACAAACCAAATCTCTTCTCTGTCCTACTGGCATGTGTTCTTGCTAACAGTTATAGCAGGAAACAGCATTTGCTGGATCAACACTGTTTGCTATGTTGTCACAATTAGGAACTTCTCATCTGATCAACAAGTCGCTGTTGGAATCACAACAAGCTACCAAGGATTAAGTGCTAAGATTTATAACACCATTGTTAATGCTGTTTCCATGCAGAACAAAAGAGCTACAACTTTTCTGCTTCTAAACTCTGCCATACCTTTGATTGTTGGACTAATAGCTTCTCCTATGCTTAGAGAAATTGATGATGATGCTGCCACCACAAGGAGGAGTAAAAAAATGGGTGTTGGGTTTGTTGTTATGTTTGTTATTACAATTGCAACTGGGGTTTATTCTGTGATCACAAGCTTGGAATTTGTATCTAGTAAAATATCTCAAAAGGGTAACCTTTTTGGTATTGTAGTGACCCTCTTGATCCCTCTATTAGTCCCATTTTCAATGAAGATCTATGAACTTGTTGGATCATGGCAAACAAATAGAGAGAATTCATTAAGGGTATGTGTGGAAGAGAGCAATAATAATAGTGAAGTGAAAGAGAGTGAAGAAGAAGAGCATGTTGATAATAATGAAAAAGTAGTAATTAGTAGAAGCAGAGAAGAGATTGAAGTGAAGTTGATGATTAGAAGAATAGATTTTTGGCTATATTTCTTTGTGTATTTGTTTGGTGCAACACTTGGTTTGGTGTTTCTTAACAATTTGGGACAAATAGCTGAGTCAAGGGGTTGCTCTGGCACTTCTTCTTTGGTGTCTTTGTCTTCATCGTTTGGATTCTTTGGAAGGCTCATGCCATCTCTTATGGACTACTTTTACAGGGGCAAGAATGTAATATCAAGACCAGCATCAATGGTAGCAATGATGGCACCAACAGCAGGTGCATTCTTCTTGCTGCTAAACAAAACACACCTAGCACTCTACACAAGCACTGCCATAATTGGAGTGTGCACTGGAGCAATCACTTCAATCTCAGTCTCAACCACAAGTGAGTTATTTGGAACAAACAATTTCTCAGTGAACCATAACGTTGTGGTGGCAAATATTCCAATGGGCTCATTTCTCTTTGGTTACTCTGCTGCACTTGTTTACCATAACCAAGGGAATCATCATGGCAAGTGCTTTGGAATGGAATGTTATAGAGACACTTTTATTGTCTGGGGTTGTCTTTGTTGGTTTGGGACTTTGTTGGCTTTGCTTTTGCATTTTAGAACTCGCAAGTTTTACTCATCACAAAAATGA 1572 0.3963 MASSTTFNQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLFGFFSGMAAIYLPLWLVLMIGTTLGLVGYGVQYLFTTNQISSLSYWHVFLLTVIAGNSICWINTVCYVVTIRNFSSDQQVAVGITTSYQGLSAKIYNTIVNAVSMQNKRATTFLLLNSAIPLIVGLIASPMLREIDDDAATTRRSKKMGVGFVVMFVITIATGVYSVITSLEFVSSKISQKGNLFGIVVTLLIPLLVPFSMKIYELVGSWQTNRENSLRVCVEESNNNSEVKESEEEEHVDNNEKVVISRSREEIEVKLMIRRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGCSGTSSLVSLSSSFGFFGRLMPSLMDYFYRGKNVISRPASMVAMMAPTAGAFFLLLNKTHLALYTSTAIIGVCTGAITSISVSTTSELFGTNNFSVNHNVVVANIPMGSFLFGYSAALVYHNQGNHHGKCFGMECYRDTFIVWGCLCWFGTLLALLLHFRTRKFYSSQK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61210g00002 523 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 520 - -
Stsc61210g00002 523 Pfam Nodulin-like 9 258 IPR010658 -
Stsc61210g00002 523 SUPERFAMILY MFS general substrate transporter 25 517 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61210g00002 Stsc-Chr61210 16508 18602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61210g00002 10 522 Nodulin-like Gene Family AT2G30300 49.518 5.40e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61210g00002 - - gmx:100808034 736.873