Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61210g00001 ATGCCACTCTCACAACTCATTATTTCCTTACAAATTCATCCTTCAAAGACCTCCTTCATCCAGCGCTTGATGAGAATCTTGATCAACTCCGGCTTCATCGCCACCAAGAATAATATCAACAATGATGATAACGAAGTTGAGTATTTACTAACTGATTCATCAATGTTGCTGCTCAAGAACAACCCTTTAAGTATGACACCTTTCGTCCTCTTGTCTCTTGATCCAGTTATGATAAAGCCATGGCATCAATTGTCTACCTGGCTGATGAAGAATGATTGCGATGGAGATCGCGATCGAATGCCGTTCGAAACCGAACATGGGATCATTCTTTGGGATTATGCTAGCCGTGTGCCTAAGCTTAATCTCTTGTTCAATGATGTCACGGCGAGAGATGCTCAGTTAGTGAGCAGTTTGTTGCTTGGAGATGAAAAGTGGAAGGAAGTGTTTGAGGGATTGGAATCGTTGGTTGATGTTGGTGGAGGAACTGGGACTATGACAATGGCAATTGCCAAATCATTTCCAAAGATGAGTTGTGTTGTGTTTGATCTTCCACATGTGGTTGCTGGCTTCCAAGGAAACGATGAGAACCTAAAATATGTTGGAGGGAACATGTTTGAAGCTATTCCTCCATGTGACGCCATTTTGTTGAAGTGGATTCTGCATGATTGGAACGACAAAGAATGCATGAACATACTGATGAAATGTAAGGAAGCAATCACAAAGAAGGGCAAAAAGGGGAAAGTGATTATCATAGACATGGTGGTCGATGATGAGGACAATAATAATAAGAAAGATGATGAAGTTGAAACACAACTCTTCTTTGACATGCTGATGATGGTGGAAGTCGGTGGAAAGGAGAGAAGTAAAAAAGAATCGATCCATTTGACCAATGATGCCACCTTCCGCCACACTGCCAATAGCGGACACCCATGTCCCGAACCATTGAAGTAG 951 0.4217 MPLSQLIISLQIHPSKTSFIQRLMRILINSGFIATKNNINNDDNEVEYLLTDSSMLLLKNNPLSMTPFVLLSLDPVMIKPWHQLSTWLMKNDCDGDRDRMPFETEHGIILWDYASRVPKLNLLFNDVTARDAQLVSSLLLGDEKWKEVFEGLESLVDVGGGTGTMTMAIAKSFPKMSCVVFDLPHVVAGFQGNDENLKYVGGNMFEAIPPCDAILLKWILHDWNDKECMNILMKCKEAITKKGKKGKVIIIDMVVDDEDNNNKKDDEVETQLFFDMLMMVEVGGKERSKKESIHLTNDATFRHTANSGHPCPEPLK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61210g00001 316 SUPERFAMILY "Winged helix" DNA-binding domain 1 62 IPR036390 -
Stsc61210g00001 316 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 62 303 IPR029063 -
Stsc61210g00001 316 PIRSF O-mtase 1 309 IPR016461 GO:0008168
Stsc61210g00001 316 Gene3D - 1 57 IPR036388 -
Stsc61210g00001 316 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 316 IPR016461 GO:0008168
Stsc61210g00001 316 PANTHER O-METHYLTRANSFERASE 3 301 IPR016461 GO:0008168
Stsc61210g00001 316 Gene3D Vaccinia Virus protein VP39 58 311 IPR029063 -
Stsc61210g00001 316 FunFam O-methyltransferase ZRP4 59 306 - -
Stsc61210g00001 316 Pfam O-methyltransferase domain 81 302 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61210g00001 Stsc-Chr61210 8135 11930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61210g00001 13 302 Monolignol Biosynthesis Gene Families AT5G54160 30.034 1.50e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61210g00001 - - gmx:100781008 332.798