Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61209g00001 ATGTCTCTTGATATGATCCATGATGTTCTGTCCTGGACTACCCTGTTACCAATCCTTGTGTTAATAGTCTCATTCAATTTCTTGTGGCACAAGAAATGTAGTAACAGAGAAAAGAAGAAGCTCCCACCTGGGGACATGAAGTTTCCATTGATTGGTGAGACAATGGAGTTCTTCAATGCTCAGAGGAGGAACCAATTGTTCGAGGAATTCGTCCGGCCGCGAGTTCTAAAGCACGGAAAGATCTTCAAAACAAGGATAATGGGGTCTCCAACTGTGATTGTGAATGGTTCTGAAGCAAACAGATTCTTCCTAACCAATGAGTTTAAGTTGGTGAAGAGTTCTTGGCCTTCTTCCTCTGTTCAGCTCATGGGAACCGATTCCATTATGGAGACAGACGGCGAAAGGCATCGATTCCTTCGCGGCTTGATCGGAACTAGCCTTGGCTATGCAGGGCTAGAGATTCTAGTTCCAAAGCTGTGCAACCATGTTAGATTCTTCTTGGAATCTAAATGGGAGGGTGAAGGAAACACAATTAGTCTCTACCGTTCGACGAAAATGCTAACGTTTAGCATAGTTTTCGAGTGCTTGTTGGGAATCAAGGTGGAACAAGGCATGCTAGAGACATTTGAGAAGGTTCTAGAAGGTGTGTTTTCGCCGGCTATCGAGTTTCCGGGGACGAAGTTTTGGAGGGCAAAGAAGGCAAGGATGGAGATAGAGAAGGCTCTTAGAAAAGAAGTTAGAGAGAAGAGGAAGGAGATGGAAGAGAATTTGCATAGTAATGAGAAAGAAGATGGAATGCTTCTTTCAAGATTGGTTAATGCTATGATCAAAGGTGAGATCAGTGAGAAAGAGGTCATTGATAATGTGGTGCTGCTGGTTTTTGCAGCTCATGATACAACTTCTTTCGCCATTGCCATGACCTTCAAGATGCTTGCACAGCATCCTGATTGCTATAGCAAGTTGCTTCAAGAACATATTGATATAACGAAAAACAAAGAAAGAGATGAGAATCTCTCAATGGAGGATATAAAGAAGATGAAGTATACATGGCAAGTTGCTAGAGAAAGCATGAGATTGTTCCCTCCTATCTTTGGCTCTTTTAGGAAAGCAATTACTGATATTGAATATGAAGGATACACCATACCTCAAGGATGGAAGGTGTTATGGACAACATATGGGACACATTACAATGAAGAGTATTTTAAGGAAGCTCAAAGTTTCAAGCCAAGTAGGTTTGAAGAAGAAGAAATGCCACAATATGCATTTGTTCCATTTGGAGGAGGGCCAAGAATGTGTGCTGGGTACCAATTAGCAAAGATTAATATCCTAATTCTTGTTCATTATGTTGTCACCAAATATGATTGGTTCTTACTACATCCACAGGAACCAATCACCATGGATCCTCTTCCATTCCCATCCCTTGGAATGCCAATTAGATTTTTTCCCAAGCAAAATTGA 1458 0.4143 MSLDMIHDVLSWTTLLPILVLIVSFNFLWHKKCSNREKKKLPPGDMKFPLIGETMEFFNAQRRNQLFEEFVRPRVLKHGKIFKTRIMGSPTVIVNGSEANRFFLTNEFKLVKSSWPSSSVQLMGTDSIMETDGERHRFLRGLIGTSLGYAGLEILVPKLCNHVRFFLESKWEGEGNTISLYRSTKMLTFSIVFECLLGIKVEQGMLETFEKVLEGVFSPAIEFPGTKFWRAKKARMEIEKALRKEVREKRKEMEENLHSNEKEDGMLLSRLVNAMIKGEISEKEVIDNVVLLVFAAHDTTSFAIAMTFKMLAQHPDCYSKLLQEHIDITKNKERDENLSMEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGYTIPQGWKVLWTTYGTHYNEEYFKEAQSFKPSRFEEEEMPQYAFVPFGGGPRMCAGYQLAKINILILVHYVVTKYDWFLLHPQEPITMDPLPFPSLGMPIRFFPKQN 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61209g00001 485 FunFam Taxadiene 5-alpha hydroxylase 32 483 - -
Stsc61209g00001 485 Pfam Cytochrome P450 42 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 Coils Coil 231 263 - -
Stsc61209g00001 485 PANTHER CYTOCHROME P450 26 38 468 - -
Stsc61209g00001 485 Gene3D Cytochrome P450 30 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Stsc61209g00001 485 PRINTS E-class P450 group I signature 284 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 PRINTS E-class P450 group I signature 304 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 SUPERFAMILY Cytochrome P450 36 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61209g00001 485 CDD CYP90-like 74 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61209g00001 Stsc-Chr61209 2832 4807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61209g00001 9 387 Cytochrome P450 AT2G42850 62.338 6.37e-157 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61209g00001 - - gmx:100793336 756.903