Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61206g00003 ATGGCGGGAGAAGGGGGCGATATTGGCGTTGCCAATGGCGCTGATGAAACACCAAACCCGGGATCTGCAGCCTCCTCTCCCAAGAGCAAGGTCAAGTTCATGTGCAGCCACGCCGGCAAGGTTCTTCCCCGTCCCTCCGATGGCCTCCTCAAGTACGTCGGCGGCGAGACTCGTGTCGTTTCTGTCCCTAGGAACGTCACTTTCTCAGAGTTGATGAAGAAGCTGAGTTCAATGATCGATGGAGTAGAAACCATGGTGCTAAAGTATCAACTGGTGCCTGAAGATCTAGACACACTGGTATCGGTGAGGAACGAGGAGGATCTAAAGCATATGATTGAAGAGCATGACCGCCATGAACTTGGAGGAGCTCCCCTGCTGCGTACATTCTTGTTCCCTTCCAAGCCAATTTTGGTGTACAACCAAGGCACATCAGGGACTGAACCCTACGCCTTGGAGCAGCGCTACATTGATGCCATCAACGGCTTCCTACGCGTAAGCCCAAGGTCAAGGCCTAGTCCAATCAGGGCTCCATTCAATATCCCCTCTGCCTGTTCATCCCCCAAATCTAACTCCCCGGACGGTCACACTGCAGATTTGGTCCATGAATCGCCGCCCATTCACGGTCCCATTCTGGGTCTAGGCCGCCGTAGTAGCAGCATGCATAGAGTCCACAGCTCTCCCAGCATCTCCAGCCTAAGCAACCTTCACAGCCTTAGTGTCCAACAGCATGAACACCACAACCATTATCACAATCAAAGCCCCAACCATAGTAGCCAGGTGCAGAGTCAGAATCAGAGCCACCACCCTCCTACTCATCTGCCTGCTTCTTATCAAAGAACGCCGCCACAAGATCCGCAAGTTGGGATGGGAAGGCCGCCCCCGCTCTTGGCACTGAGGAGGTCTGATATGGGTAGTAGGAGTACAAACAGCAGCAGTAGTACTAGTTACAGCTATTATTACCCGGCTGCTGCTGATAACAATATTAATAGACCCCCAAAAGGATACGGATACTACGATGAATCTACATCTTATGGTGGTGGTGTCATGGTTGAAAGAGTTGGCAGTATGCCTCAGAGTCCAAGAGCTTCTATATGGGAATAG 1101 0.5186 MAGEGGDIGVANGADETPNPGSAASSPKSKVKFMCSHAGKVLPRPSDGLLKYVGGETRVVSVPRNVTFSELMKKLSSMIDGVETMVLKYQLVPEDLDTLVSVRNEEDLKHMIEEHDRHELGGAPLLRTFLFPSKPILVYNQGTSGTEPYALEQRYIDAINGFLRVSPRSRPSPIRAPFNIPSACSSPKSNSPDGHTADLVHESPPIHGPILGLGRRSSSMHRVHSSPSISSLSNLHSLSVQQHEHHNHYHNQSPNHSSQVQSQNQSHHPPTHLPASYQRTPPQDPQVGMGRPPPLLALRRSDMGSRSTNSSSSTSYSYYYPAAADNNINRPPKGYGYYDESTSYGGGVMVERVGSMPQSPRASIWE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61206g00003 366 Gene3D - 51 131 - -
Stsc61206g00003 366 MobiDBLite consensus disorder prediction 252 283 - -
Stsc61206g00003 366 SUPERFAMILY CAD & PB1 domains 47 139 - -
Stsc61206g00003 366 CDD PB1_UP2 34 131 - -
Stsc61206g00003 366 PANTHER OS05G0427100 PROTEIN-RELATED 21 309 - -
Stsc61206g00003 366 MobiDBLite consensus disorder prediction 302 316 - -
Stsc61206g00003 366 Pfam PB1 domain 50 132 IPR000270 GO:0005515
Stsc61206g00003 366 MobiDBLite consensus disorder prediction 219 240 - -
Stsc61206g00003 366 SMART PB1_new 45 133 IPR000270 GO:0005515
Stsc61206g00003 366 MobiDBLite consensus disorder prediction 1 28 - -
Stsc61206g00003 366 MobiDBLite consensus disorder prediction 170 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61206g00003 Stsc-Chr61206 6237 7492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61206g00003 30 163 MAP Kinase Kinase Kinase AT5G57610 47.101 2.16e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61206g00003 - - aip:107638505 527.324