Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61204g00003 ATGGCATCATCACAGCATCTTGGAGGAGTGGTGTGTAGTTGCATGATCATCATAATTTTGTTGGGTGCTTGTTCAGATGTTGTTGAAGGTGGTAGAGATTTCAAGGTTGGTGATCACTTGGGTTGGCATGAACCTGGTCCCAATAATGTTGCATATTACATTCAATGGGCTCAAAGGAACAGATTCCAGATTGGTGACTCTCTTGTGTTTGAGTACCAAAATGACTCGGTTCTAGTTGTTGAAAAATGGAACTACTTCCATTGTGATACAAAGAATCCAATAACATCATATGATGATGGAAACAGCACAGTGATTCTTGATAGGTCCGGTTTCTTCTACTTCATAAGTGGAACAGAGAATCACTGCCAGAGTGGCCAGAAACTTATTGTGGAAGTTATCTCCTCACAGCACATGGCAATTGTTCCGGCCGCCTCCCCGGCGCCGCCCGAAGAAGCTTCCTCGTCGTCGTCGGAAATGGCTCCTACACCATACCATTATTCTCATCATGGCTCCAGTGATGCTTCATCAACATCAAGTTTTATGCTGGTTGGTTCAGCAATTATGGCTCTTCTTGTTACCTTTGTAGTTGTGCTAGTTTGA 600 0.4367 MASSQHLGGVVCSCMIIIILLGACSDVVEGGRDFKVGDHLGWHEPGPNNVAYYIQWAQRNRFQIGDSLVFEYQNDSVLVVEKWNYFHCDTKNPITSYDDGNSTVILDRSGFFYFISGTENHCQSGQKLIVEVISSQHMAIVPAASPAPPEEASSSSSEMAPTPYHYSHHGSSDASSTSSFMLVGSAIMALLVTFVVVLV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61204g00003 199 ProSiteProfiles Phytocyanin domain profile. 32 134 IPR003245 GO:0009055
Stsc61204g00003 199 Gene3D - 32 143 IPR008972 -
Stsc61204g00003 199 MobiDBLite consensus disorder prediction 144 170 - -
Stsc61204g00003 199 SUPERFAMILY Cupredoxins 32 133 IPR008972 -
Stsc61204g00003 199 FunFam Early nodulin-like protein 1 31 137 - -
Stsc61204g00003 199 PANTHER BLUE COPPER PROTEIN 33 152 IPR039391 GO:0009055
Stsc61204g00003 199 CDD OsENODL1_like 32 133 IPR041846 -
Stsc61204g00003 199 MobiDBLite consensus disorder prediction 149 170 - -
Stsc61204g00003 199 Pfam Plastocyanin-like domain 51 126 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61204g00003 Stsc-Chr61204 7461 8362 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61204g00003 3 146 Phytocyanin Superfamily AT1G79800 48.993 1.50e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61204g00003 - - aip:107614831 292.737