Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61191g00005 ATGGAGTCACTTCAGAAGCCGCTACTAAGCATAGCCAACTTTGAGCTTCAACCGCTCCACATGGCTGCCATGCTCTTCGTCCCATTCATGCTGCTGCTAGGTTTAGTCTCTAGAATCCGCCGAAGGCCACCATATCCACCAGGGCCTAAAGGCTTGCCCATCATAGGAAGCATGCTTATGATGGAGCAGTTAACCCACCGTGGCCTTGCCAAGCTAGCAAAACAGTACGGCGGAATATTCCACCTGCGCATGGGGTTCCTCCACATGGTGGCGGTATCCGACCCTGAGTCAGCAAGGCAAGTCCTCCAAGTCCAAGACAACATCTTCTCAAACCGTCCAGCCACCATAGCCATAAGCTACCTCACCTACGACCGCGCCGACATGGCGTTCGCCCACTACGGTCCATTCTGGCGGCAGATGCGTAAGCTGTGCGTGATGAAGCTCTTCAGCCGGAAGCGGCAAGAGTCATGGGAGTCCGTCAGAGACGAAGTGGACAAGGTGGTCCGTTCCGTGGCCTCCAACACCGGAAATTCCATCAACATTGGCGAAGTGGTTTTCAACCTCACCAAGAACATCATCTATCGCGCTGCCTTCGGGTCCAGTTCCCAAGAAGGGCAGGACGAGTTCATCAAGATCCTTCAGGAGTTCTCTAAGCTCTTTGGAGCTTTCAACATCGCAGATTTCATCCCTTTCCTTGGTGGAATCGATCCTCAGGGCCTTAACGAGAGGCTCGTGAAGGCTCGTGGTGCGTTGGACAGTTTCATAGACAGGATCATCGACGAGCATGTTGAGAAGATGAATAATAATAATAACAATAATAAAGAAGATTGTGAGTCTGATATGGTGGATGAGTTGTTGGCTTTCTACAGCGAGGAGGGCAAGTTGAACAATGAAGCGGAGGATCTCCACAACTCTATCAAACTCACAAAGGATAACATCAAAGCCATCATTATGGACGTTATGTTTGGAGGTACAGAGACGGTGGCGTCGGCAATAGAGTGGGCCATGGCAGAGCTCATGAGAAGCCCAGAAGATCTGAAGCGGGTTCAACAGGAGCTGGCCCAAGTTGTAGGCCTGGACCGTCGGGTTGAGGAGTCCGACTTCGAGAACCTCACCTACCTCCGATGCGCACTCAAGGAGACCCTCCGCCTCCACCCGCCCATCCCCCTCCTCTTACACGAGACAGCGGAGGAAACAACCATCGGAGGATACTTTATCCCGAAGCGGGCGCGCGTCATGATCAACGCGTGGGCCATAGGAAGGGACCCCACCTGCTGGGACGAGGCGGAGACGTTCAGGCCCGCACGGTTCTTGAAGGCGGGCGTGGCTGACTTCAAGGGGAGCAACTTCGAGTTCATACCGTTCGGGTCGGGTAGAAGGTCTTGCCCGGGAATGCAGTTGGGGCTGTACGCGCTGGAGCTGGCGGTGGCCCATCTGCTCCACTGCTTCACGTGGGAGCTGCCAGACGGGATGAAGCCCAGCGAGATGGACATGGGCGATGTGTTCGGACTGACCGCTCCCAGAGCCAGTCGGCTCCACGCTGTTCCCACCAAGCGCCTTCTCTGCCCTCTCTCTTAG 1578 0.5501 MESLQKPLLSIANFELQPLHMAAMLFVPFMLLLGLVSRIRRRPPYPPGPKGLPIIGSMLMMEQLTHRGLAKLAKQYGGIFHLRMGFLHMVAVSDPESARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRQESWESVRDEVDKVVRSVASNTGNSINIGEVVFNLTKNIIYRAAFGSSSQEGQDEFIKILQEFSKLFGAFNIADFIPFLGGIDPQGLNERLVKARGALDSFIDRIIDEHVEKMNNNNNNNKEDCESDMVDELLAFYSEEGKLNNEAEDLHNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDLKRVQQELAQVVGLDRRVEESDFENLTYLRCALKETLRLHPPIPLLLHETAEETTIGGYFIPKRARVMINAWAIGRDPTCWDEAETFRPARFLKAGVADFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPRASRLHAVPTKRLLCPLS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61191g00005 525 Gene3D Cytochrome P450 38 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Stsc61191g00005 525 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 FunFam Cytochrome P450 84A1 38 518 - -
Stsc61191g00005 525 Pfam Cytochrome P450 46 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 SUPERFAMILY Cytochrome P450 46 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PANTHER CYTOCHROME P450 84A1-RELATED 19 524 - -
Stsc61191g00005 525 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61191g00005 525 CDD CYP71-like 75 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61191g00005 Stsc-Chr61191 24446 27387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61191g00005 53 524 Monolignol Biosynthesis Gene Families AT4G36220 78.647 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61191g00005 K09755 - gmx:100783430 851.277