Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61189g00001 ATGGGCTCATTCTCTGGAACTTGTGAAATAGTTGAAGCAACAGAGGAGCTAAATACAGGGAAGACTATGGCAAGTTGTCAGTCCAATTATGGGTATAGCATGGCTGAGAAAAATCAGAAGCTTCCGGTGCTGAAACTGGGCTACAAGGACAATCTGGACGATGATATAAATAAGCTATTTGAATCAATTACTCTTAAATCTTCATCAAGGGACTTGGGCCGTTTACTAGATGGCACAAGCCATAAGATGAAAAGTGCATTGAAAAAGCCAATCGCAGTGGGTGTTTCGCGGTCCCCGCGAGGTGGGACGTCTGAGCCCGTAAATTTGAAGCAGGCTTTAAGAGACCTTTGTATTTCTAAGGCATCAGAAATGGCTGCTATGAAACGATTATCAAAAGCAACAGCTTCTCCAAGAATATCAGAGGTTGGGAAGATACAAACATTGTACAATTCAGTTGTAGCTGAAACCAGTAGAGCTGGGCCTCCTTTGGTTGAAAATAAAGAGAATGGAATTGAAATATCCTTAGTGCCAGAAGAAAGTAAGTTAGTTTCCTTGGAGAAATCAACTCATTCTTATCAAAGTGCTGAAATCACTTCACCAAGCCAAGTCATCCGTACTTCTCCGAAAGTTGCTGTTGCAACCAGTCAACATAGTTATAAGGCTTCATTGCCTCAAGTTGATCTGACATGTTCATCAAGTGAAGTTGGGGTTCACTCACGGCAAGTGGTGCCTGTTCGATCAGAAAAACCACCATCCGCAACTTTTCCCTCTCCATCTCCATCTTCCACAACTGGAACCAAATTGGAGTCGCCCAAAATTGTTTCTTCTCCTAAAAAAGGCAGAAATAAACCATCTGCCTCAAATAGTGGCCATAAAGGTAGATTGCAAACAACATCTTCGCCATCTTCTTCTGTAAATGGCTATAGAGTTAACAAAGTATCAAGGCATACCACCCGTCCAGTCAAATCGGTCCGCAAGAGCAAGAATTTGAGTATAAAAAAGCTAAAGGAGAGTTCAGGCTCTGGTTTGTGCAATCCTTCAACCAATAAAGTTCATAACAAGCCAGCTCCAGTTCCCCCTCAAATTATTTGCGAGAGATGTCATTGTGCTTTAGAGAATACAAATGAAGAAAAAGGGCATCATATCACAACACCAGACTCCATCAGTCCTGAAGTGGTAAACTCAGGTGAAGAGCACCATGGTTCAAATAAACCTGATTTGGCATCATCTAACAGTAACAAAAAACTTGGTTGTGGGGACATTGGGACAGTATATCTTGCTGAACTAATTGGCACAACTTGCTTGTTTGCTATCAAGGTCATGGACAATGAGTTTTTGGCAAGGCGGAAGAAGATGCCGAGGGCACAAACTGAGAGAGAAATATTAAGGATGCTGGATCATCCATTTCTTCCCACACTGTATGCCCAATTTACATCTGATAATCTGTCATGCCTGGTTATGGAGTATTGTCCAGGTGGAGATCTTCACGTACTACGGCAGAAGCAGCTTAGTAGATGTTTTTCAGAGACAGCAGCAAGGTTTTATGTTGCCGAAGTCCTTCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTGTTTATCGTGACTTGAAACCTGAAAACATTCTTGTCCGGGAAGATGGACACATTATGCTCACAGATTTTGACCTTTCACTAAGGTGTGCGGTTAGCCCAACGCTTCTGCCATCCCCTTCTGAGATAGAACCAGCAAAACTTTCTGGCCCTTCTGCACAACGAAGTTGCATTGAGCCATTCTGCATTGAGCCCTCTTGTCAAGTTCCATGTTTCAGCCCTAGATTCTTACCCGCAGCAGCAAAAGCAAGGAAACTAAAAGTTGATCTTGCAGCCCAGATCAGATCATTGCCACAGCTTGTGGCTGAGCCTACCGATGCCAGATCAAACTCATTTGTTGGAACACATGAATACTTGAGTCTTAGATTCCCAGACAGCCCATTTGTTAGCTTCCAAGCTAGGGATCTGATAAGAGGGTTGCTGGTTAAGGAACCTGAGAACCGTTTGGGCTCAGAGAAAGGTGCTGCCGAGATTAAACAGCATCCTTTCTTTGATGGCCTCAACTGGGCCTTAATTCGTTGTGGTGTCCCTCCAGAGATTCCAGAGTATTGTGATTTTGGAGTTTCGGACGTGACACCAGAAAGCAAGGGTGGCAAGTATTTAGAGTATAATGCAACAGGAGAGCCTTTGGAATTTGAGTTGTTTTAA 2238 0.4325 MGSFSGTCEIVEATEELNTGKTMASCQSNYGYSMAEKNQKLPVLKLGYKDNLDDDINKLFESITLKSSSRDLGRLLDGTSHKMKSALKKPIAVGVSRSPRGGTSEPVNLKQALRDLCISKASEMAAMKRLSKATASPRISEVGKIQTLYNSVVAETSRAGPPLVENKENGIEISLVPEESKLVSLEKSTHSYQSAEITSPSQVIRTSPKVAVATSQHSYKASLPQVDLTCSSSEVGVHSRQVVPVRSEKPPSATFPSPSPSSTTGTKLESPKIVSSPKKGRNKPSASNSGHKGRLQTTSSPSSSVNGYRVNKVSRHTTRPVKSVRKSKNLSIKKLKESSGSGLCNPSTNKVHNKPAPVPPQIICERCHCALENTNEEKGHHITTPDSISPEVVNSGEEHHGSNKPDLASSNSNKKLGCGDIGTVYLAELIGTTCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLSRCFSETAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLPSPSEIEPAKLSGPSAQRSCIEPFCIEPSCQVPCFSPRFLPAAAKARKLKVDLAAQIRSLPQLVAEPTDARSNSFVGTHEYLSLRFPDSPFVSFQARDLIRGLLVKEPENRLGSEKGAAEIKQHPFFDGLNWALIRCGVPPEIPEYCDFGVSDVTPESKGGKYLEYNATGEPLEFELF 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61189g00001 745 MobiDBLite consensus disorder prediction 315 329 - -
Stsc61189g00001 745 FunFam serine/threonine-protein kinase D6PK-like 494 561 - -
Stsc61189g00001 745 SMART serkin_6 410 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61189g00001 745 Gene3D Phosphorylase Kinase; domain 1 414 493 - -
Stsc61189g00001 745 MobiDBLite consensus disorder prediction 377 410 - -
Stsc61189g00001 745 ProSiteProfiles Protein kinase domain profile. 410 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61189g00001 745 PANTHER FLIPPASE KINASE 1-RELATED 210 649 - -
Stsc61189g00001 745 MobiDBLite consensus disorder prediction 334 354 - -
Stsc61189g00001 745 MobiDBLite consensus disorder prediction 239 356 - -
Stsc61189g00001 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Stsc61189g00001 745 Gene3D Transferase(Phosphotransferase) domain 1 494 559 - -
Stsc61189g00001 745 Gene3D Transferase(Phosphotransferase) domain 1 651 703 - -
Stsc61189g00001 745 FunFam Serine/threonine-protein kinase D6PK-like 410 493 - -
Stsc61189g00001 745 Pfam Protein kinase domain 412 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61189g00001 745 MobiDBLite consensus disorder prediction 280 313 - -
Stsc61189g00001 745 SUPERFAMILY Protein kinase-like (PK-like) 414 722 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61189g00001 Stsc-Chr61189 17240 22017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61189g00001 414 745 AGC Kinase Gene Family AT2G36350 66.925 2.98e-177 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc61189g00001 Pkinase 4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61189g00001 - K08286 gmx:100813470 814.298