Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61180g00008 ATGGCTTGTTCCATTCGTCCCACTCTCTCTTCCTTTCGCTTTTCATCCCTTGCCACTCGTTCTCTCTCCCGCTCTTTCCTTCGTCTTCCCGACATCACTACCAGAGGATTAGGTGAGTCCCATCGATTGAGAGCAACGGGGATGCTGAGGCGAGATGGGAATATCATGAGAGTCATGGCTTCCCAAGCAAGCACCGCTGCTTCACCCGAAAACACACTCGAATGGGTCAAGCAAGATAAGAGAAGGATGCTTCATGTTGTCTACCGTGTTGGCGATTTGGACAGGACTATCAAGTTCTATACAGAGTGCCTGGGAATGAAGCTCCTCAGGAAGCGTGACATACCAGAGGAGAGATATACCAATGCCTTTCTTGGATATGGCCCCGAAGATTCCCACTTTGTTATTGAACTCACCTACAATTATGGAGTAGACAAGTATGACATTGGAGCTGGATTTGGACATTTTGGCATTGCTGTTGATGATGTTACAAAGACAGTGGAACTAATAAGAGCCAAGGGGGGCAAAATAACTAGAGAGCCTGGTCCCGTCAAGGGAGGCCGCACGGTTATTGCATTCATTGAAGATCCTGATGGCTACAAATTTGAACTTTTGGAAAGAGGCCCTACTCCCGAGCCCTTGTGCCAAGTAATGCTTAGAGTTGGTGATCTTAATCGTTCCATTGAATTTTATGAGAAGGCTTTTGGAATGGAGCTGCTTCGAACACGAGATAATCCAGAATACAAGTATACCATAGCAATGATGGGTTATGGTCCAGAAGATAAAAGTACTGTTCTGGAGTTGACTTACAATTACGGAGTCAAAGAATATGATAAAGGAAATGCTTATGCTCAGATAGCAATAGGCACAGATGATGTGTACAAAACCGCAGAAGCTGTTAAGTTAGCTGGAGGAAAGATTACTCGGGAACCTGGACCACTACCTGGTATCAACACAAAAATTACAGCATGCTTGGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTGGATTTCCTTAAAGAGCTGGAGTAA 1035 0.4483 MACSIRPTLSSFRFSSLATRSLSRSFLRLPDITTRGLGESHRLRATGMLRRDGNIMRVMASQASTAASPENTLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVTKTVELIRAKGGKITREPGPVKGGRTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKSTVLELTYNYGVKEYDKGNAYAQIAIGTDDVYKTAEAVKLAGGKITREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE 344
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc61180g00008 344 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 213 336 IPR029068 -
Stsc61180g00008 344 CDD GlxI_Ni 83 204 - -
Stsc61180g00008 344 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 82 206 IPR037523 -
Stsc61180g00008 344 PANTHER LACTOYLGLUTATHIONE LYASE 61 344 - -
Stsc61180g00008 344 ProSitePatterns Glyoxalase I signature 1. 85 106 IPR018146 GO:0004462|GO:0046872
Stsc61180g00008 344 Gene3D - 209 344 IPR029068 -
Stsc61180g00008 344 FunFam Lactoylglutathione lyase 79 208 - -
Stsc61180g00008 344 ProSitePatterns Glyoxalase I signature 1. 215 236 IPR018146 GO:0004462|GO:0046872
Stsc61180g00008 344 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 82 208 IPR029068 -
Stsc61180g00008 344 Gene3D - 53 207 IPR029068 -
Stsc61180g00008 344 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 212 336 IPR037523 -
Stsc61180g00008 344 FunFam Lactoylglutathione lyase 209 344 - -
Stsc61180g00008 344 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 83 203 IPR004360 -
Stsc61180g00008 344 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 215 330 IPR004360 -
Stsc61180g00008 344 NCBIfam lactoylglutathione lyase 82 207 IPR004361 GO:0004462|GO:0046872
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc61180g00008 Stsc-Chr61180 20993 24706 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61180g00008 215 333 Calmodulin-binding Proteins AT1G08110 28.276 9.92e-11 59.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61180g00008 K01759 - gmx:100780463 586.645