Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61174g00001 ATGTTCTTTCTTCGACGAAACCCACCACCACCCTCTCCCCGTCACCCTCCGACACGATCCCGCCGCACCGCCGCGTCTGAGCCCGTCCACATCTCATCCCACCAACGTTGTCGGCACCGTCGAAGCATTGCATCGAAGTCCCTGGTCGCCGTCTTGAAGGTAGAAGAAGTCTCAGCCGCTGTCGTCTCAGCGCCGCGACCCAGCCACCCTCATCTCATCCCGTCGTCGTCGACCTTGCAGGAGCGCCGTCGCACCGTCGTCGCCTCGGAAGTGTCAGCATTCAGCGCCGCCCTTTCTGCCTTGAAGATTGACTTCACTAATCTTGCTTCATTCAAACATGCAGAGTTTTCAGTAGGGAAGGCACTTAAATGGTCTAATAGACTTGCAATTCTAATTGGAGTTGCTAAAGCTGTGCATTTCCTACACACTGGTGTCATCCCTGGTTGTTTTGAAAACCAGCTAAAGACAAGGAATATTTTTCTTGATGAGCATCGCATTCCGAAATTAAGCGACTACGGAATTGCCATCATTAGAGAAGAAATAGACAAGCATGAGGTACCTTTGCTGTGA 570 0.5175 MFFLRRNPPPPSPRHPPTRSRRTAASEPVHISSHQRCRHRRSIASKSLVAVLKVEEVSAAVVSAPRPSHPHLIPSSSTLQERRRTVVASEVSAFSAALSALKIDFTNLASFKHAEFSVGKALKWSNRLAILIGVAKAVHFLHTGVIPGCFENQLKTRNIFLDEHRIPKLSDYGIAIIREEIDKHEVPLL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61174g00001 189 MobiDBLite consensus disorder prediction 1 36 - -
Stsc61174g00001 189 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61174g00001 189 MobiDBLite consensus disorder prediction 1 17 - -
Stsc61174g00001 189 SUPERFAMILY Protein kinase-like (PK-like) 104 181 IPR011009 -
Stsc61174g00001 189 Gene3D Transferase(Phosphotransferase) domain 1 106 187 - -
Stsc61174g00001 189 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 115 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61174g00001 Stsc-Chr61174 5509 6949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61174g00001 120 185 Miscellaneous Gene Families AT5G14210 69.697 4.37e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Stsc61174g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61174g00001 - - gmx:100780663 127.487