Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61173g00002 ATGTCGGAAAAACCAGACAATGATTCATCCTTGAGTTTCCCTTTGCTAACTGAGTATACCAAGGGCGCCATAGATGAAGAGAACCTCATAAACCCTCATCACTCTTCTACCACCATTACTAAGCCTGTCTCTTTCTTTCGCACCACCCTTAATGGACTCAATGCTATCTCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTAGCATCTGGAGGGTGGTTAAGCTTAACTCTTCTATTTGCTATTGCCATGGCAGCATTTTACGCAGGTGTATTGATTAAGAAATGTATGGACAAGAATTCAAGCATTAATACCTACCCTGATATTGGGGAGCTTGCATTTGGGAAAATAGGAAGACTAATAGTGTCTGTGTCAATGTACATGGAGCTCTACTTAGTCTCAATAGGGTTCTTGATTCTTGAGGGTGATAACTTGAATGAGCTCTTCCCTAACGTTGAGCTTGAATTCGTGCCCGGGTTAACAATTAGTGGGAAGCAATTCTTTGTGATTTTGGTTGCTCTTATAATCTTGCCTACTGTTTGGTTGGATGATATGAGCATGCTCTCTTATGTATCTGCAAGTGGGGTGTTTGCCTCTGCTATTATCCTCATCTCGATATCTTGGACCGCCACGCTTGGCGAAGTTGGTTTTCATCACAAGGGAACTGTTCTGAATTTGAGTGGAATCCCCACATCTGTTAGCTTGTATGCATTTTGTTATTGTGCTCACCCTGTCTTCCCTACATTGTACAATTCAATGAGGAACAAACACCAGTTCTCTAATGTTCTATTGGTGTGCTTTATATTAACCACAGCTGGTTATGCAGCCATGGCTATAATCGGGTACCTCATGTTCGGTCCGAACGTTGAATCACAAGTAACATTGAACCTGCCAATAGACAAACTAAGCTCAAGAGTTGCAATTTACACAACATTGGTCAACCCAATATCAAAGTATGCTTTGATGACAACACCTATCACCAATGCTTTGAAAAACTTGCTTCCAAGAAAGTATAAGAATAGATTCACCAAAACTTTGGTGAGCACTTTGATGGTAGTCAGCACTGTCATTATTGCCATAACTGTGCCTTTATTTGGGGAATTAATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTTCTCCCATGCTCATGTTACTTGAAGATCTCAGGAAAATACAGGATTTTGGGGTGTGAAACAATAGCCATAGTGGCTATAATTGTAGCAGCTGTGGTAATTGGAATAGCTGGGACATATACCTCAATCATGGATATTGTGCACCATTTGTAA 1299 0.4103 MSEKPDNDSSLSFPLLTEYTKGAIDEENLINPHHSSTTITKPVSFFRTTLNGLNAISGVGILSVPYALASGGWLSLTLLFAIAMAAFYAGVLIKKCMDKNSSINTYPDIGELAFGKIGRLIVSVSMYMELYLVSIGFLILEGDNLNELFPNVELEFVPGLTISGKQFFVILVALIILPTVWLDDMSMLSYVSASGVFASAIILISISWTATLGEVGFHHKGTVLNLSGIPTSVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLLVCFILTTAGYAAMAIIGYLMFGPNVESQVTLNLPIDKLSSRVAIYTTLVNPISKYALMTTPITNALKNLLPRKYKNRFTKTLVSTLMVVSTVIIAITVPLFGELMSLVGAFLSVTASILLPCSCYLKISGKYRILGCETIAIVAIIVAAVVIGIAGTYTSIMDIVHHL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61173g00002 432 PANTHER OS05G0424000 PROTEIN-RELATED 52 414 - -
Stsc61173g00002 432 Pfam Transmembrane amino acid transporter protein 43 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61173g00002 Stsc-Chr61173 13430 15226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61173g00002 44 429 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.690 3.46e-167 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61173g00002 K15015 - gmx:100794374 625.165