Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61173g00001 ATGGAAGAAGGTAATAAGCACAACGATGATGATAAGATTAGTGCACTTAACAAACCCCTTATTATAATTGACCATGAACAAGAACAAGAAGATATTGAAGATGGGGACATAATCCAAAATTCTGGTATTCATGATGAGGAACAAGGCCATGGCCATGTCCATGGCACTTCGTCTTTCCTCAACACCTGCTTCAATGGGGTCAATGCTTTGTCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTAGCATCTGGAGGGTGGTTAAGCTTAACTCTTCTATTTGCTATTGCCATGGCAGCATTTTACGCAGGTGTATTGATTAAGAAATGTATGGACAAGAATTCAAGCATTAATACCTACCCTGATATTGGGGAGCTTGCATTTGGGAAAATAGGAAGACTAATAGTGTCTGTGTCAATGTACATGGAGCTCTACTTAGTCTCAATAGGGTTCTTGATTCTTGAGGGTGATAACTTGAATGAGCTCTTCCCTAACGTTGAGCTTGAATTCGTGCCCGGGTTAACAATTAGTGGGAAGCAATTCTTTGTGATTTTGGTTGCTCTTATAATCTTGCCTACTGTTTGGTTGGATGATATGAGCATGCTCTCTTATGTATCTGCAAGTGGGGTGTTTGCCTCTGCTATTATCCTCATCTCGATATCTTGGACCGCCACGCTTGGCGAAGTTGGTTTTCATCACAAGGGAACTGTTCTGAATTTGAGTGGAATCCCCACATCTGTTAGCTTGTATGCATTTTGTTATTGTGCTCACCCTGTCTTCCCTACATTGTACAATTCAATGAGGAACAAACACCAGTTCTCTAATGTTCTATTGGTGTGCTTTATATTAACCACAGCTGGTTATGCAGCCATGGCTATAATCGGGTACCTCATGTTCGGTCCGAACGTTGAATCACAAGTAACATTGAACCTGCCAATAGACAAACTAAGCTCAAGAGTTGCAATTTACACAACATTGGTCAACCCAATATCAAAGTATGCTTTGATGACAACACCTATCACCAATGCTTTGAAAAACTTGCTTCCAAGAAAGTATAAGAATAGATTCACCAAAACTTTGGTGAGCACTTTGATGGTAGTCAGCACTGTCATTATTGCCATAACTGTGCCTTTATTTGGGGAATTAATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTTCTCCCATGCTCATGTTACTTGAAGATCTCAGGAAAATACAGGATTTTGGGGTGTGAAACAATAGCCATAGTGGCTATAATTGTAGCAGCTGTGGTAATTGGAATAGCTGGGACATATACCTCAATCATGGATATTGTGCACCATTTGTAA 1341 0.4057 MEEGNKHNDDDKISALNKPLIIIDHEQEQEDIEDGDIIQNSGIHDEEQGHGHVHGTSSFLNTCFNGVNALSGVGILSVPYALASGGWLSLTLLFAIAMAAFYAGVLIKKCMDKNSSINTYPDIGELAFGKIGRLIVSVSMYMELYLVSIGFLILEGDNLNELFPNVELEFVPGLTISGKQFFVILVALIILPTVWLDDMSMLSYVSASGVFASAIILISISWTATLGEVGFHHKGTVLNLSGIPTSVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLLVCFILTTAGYAAMAIIGYLMFGPNVESQVTLNLPIDKLSSRVAIYTTLVNPISKYALMTTPITNALKNLLPRKYKNRFTKTLVSTLMVVSTVIIAITVPLFGELMSLVGAFLSVTASILLPCSCYLKISGKYRILGCETIAIVAIIVAAVVIGIAGTYTSIMDIVHHL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61173g00001 446 Pfam Transmembrane amino acid transporter protein 56 438 IPR013057 -
Stsc61173g00001 446 PANTHER OS05G0424000 PROTEIN-RELATED 62 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61173g00001 Stsc-Chr61173 8299 15226 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61173g00001 44 443 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.603 8.84e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61173g00001 K15015 - gmx:100794374 609.372