Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61162g00003 ATGTTTTCGTGGTTGGCAAGGATAGTTTCGTCGTGCCTGAGGCCAGTAGTGAGGCGATATGCGCGTATGAACAAGGATGATGATCTCGATGACGATCCCAATTCTCTTCAAGATTCCATGTTATGGTGCAGGGATCTCGAGAAACATTCTTGCGGTGAGTTTTCTTTCGCTGTTGTTCAGGCCAATGAAGTCATTGAAGATCACAGCCAAGTTGAGACTGGTCCTGACGCCGTCTTTGTTGGTGTTTACGACGGCCATGGCGGCCCTGAGGCCTCTAAGTTCATCAATGACCACCTCTTCCGCCACCTCATCAGGATTGCTCAAGAAAATGGTTCTATCTCCGAAGATATTATCAGGGGTGCTGTTTCCGCTACCGAGGATGGGTTTCTAACTCTTGTTCGAAGGAGCTATGGGATAAAGCCTTTGATAGCGGCAATGGGTTCCTGTTGTCTGGTTGGTGTTATCTGGAAAGGAACACTGTATACTGCCAATCTTGGTGACTCTCGTGCCGTAATTGGCTCTGTAACTAGATCTGACAAGATAGTTGCAGAACAGTTGACCAGAGAGCACAACGCTAGCAAAGAGGAGGTTAGACGAGAGCTCAGATCTTTGCACCCCGAAGATTCACAAATTGTAGTTATGAAGCATGGAACATGGCGTATTAAAGGCATTATCCAGGTATCCAGATCAATAGGAGATGCATATCTAAAGCGCCCAGAGTTCTCTTTTGATCCTTCGTTCCCACGGTTCCACCTGCCCGACCCTATCCGTCGTCCTGTGCTAACAGCAGAACCATCTGTGTGTTCACGAGTTTTACAACCTACTGATAAGTTCCTTATATTTGCATCTGATGGTCTTTGGGAACACTTGACAAATCAGGAAGCAGTCGAGATTGTTCACAAAAGCCCTCGACCTGGGATTGCAAGGAGACTTCTGAAAGCTGCATTAAGCGAGGCAGCCCGGAAAAGAGAGATGAGATATAAAGACCTTCAAAAGGTTGAAAAGGGAGTTCGGCGGTTTTTTCATGACGATATCACAGTAGTTGTTATCTTCATTGACCATGAATTGGTTGGGAAGAATGTCACAGTACCTGAGTTGTCCATCAAAGGGTTTATGGACTCGGTTGGACCATCGAATTTTAGAAGCTTTCAGCATCTGCCATAA 1164 0.4613 MFSWLARIVSSCLRPVVRRYARMNKDDDLDDDPNSLQDSMLWCRDLEKHSCGEFSFAVVQANEVIEDHSQVETGPDAVFVGVYDGHGGPEASKFINDHLFRHLIRIAQENGSISEDIIRGAVSATEDGFLTLVRRSYGIKPLIAAMGSCCLVGVIWKGTLYTANLGDSRAVIGSVTRSDKIVAEQLTREHNASKEEVRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPRFHLPDPIRRPVLTAEPSVCSRVLQPTDKFLIFASDGLWEHLTNQEAVEIVHKSPRPGIARRLLKAALSEAARKREMRYKDLQKVEKGVRRFFHDDITVVVIFIDHELVGKNVTVPELSIKGFMDSVGPSNFRSFQHLP 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61162g00003 387 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Stsc61162g00003 387 ProSiteProfiles PPM-type phosphatase domain profile. 53 352 IPR001932 -
Stsc61162g00003 387 Pfam Protein phosphatase 2C 72 319 IPR001932 -
Stsc61162g00003 387 CDD PP2Cc 54 352 IPR001932 -
Stsc61162g00003 387 SUPERFAMILY PP2C-like 59 353 IPR036457 -
Stsc61162g00003 387 FunFam Probable protein phosphatase 2C 42 44 360 - -
Stsc61162g00003 387 Gene3D - 33 361 IPR036457 -
Stsc61162g00003 387 PANTHER PROTEIN PHOSPHATASE 40 350 IPR015655 GO:0004722|GO:0006470
Stsc61162g00003 387 Coils Coil 183 203 - -
Stsc61162g00003 387 SMART PP2C_4 47 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61162g00003 Stsc-Chr61162 11923 16493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61162g00003 1 383 PP2C-type Phosphatase Gene Family AT5G06750 71.684 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61162g00003 K01102 - gmx:100778238 667.537