Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61158g00003 ATGAAGGAAACCCATGTAACAGAATCAGGCAAGTATATTGTGTTCTTCCTGTACTCCTTGCATCTGACAATTTGTGGTTCAATTCAAGTCCCTTCAGATACAATCTTCCTCGATTGCGGTTCTTCCGGAGAATCATCATTCAATGGAGAAAGATGGATAGGTGACATTGGCTCTAGTTTCCTGCTTCCATCATATAATAAAATTTCTTCTTCTCTCTTTGTTTTGAACCAAGACAACAACAGAGTTCCAAAAATACCATACTCAACAACAAGAATAATTCATTCACCTCTCAACTACACTTTCTCCTTCACCACCCCAAGCCTCAAATTCATTCGTATATACTTTCTATCAACTTCATATCTAAACATGAACCCTTCCAAGGCCTATTTTTCTGTCAAAGTTGGTCGTTATACTCTTTTAAGTGGTTTTAGTCCTTTTGTTGCCGCACAAGAACTCAACTTAGCCTATTTCACCAAGGATTTCTTGGTCAATGTTGTGGAAGAGAAACTAAACATAACCATCATTCCTTCTTCTCTAGTTTCCAATGCATTTGCTTTTATAAATGGCATTGAGATATTCTCAGTGCCCTCTACTCTATATTTTCCATTTTCAAAGCTTCATGTTCCTTACCTTGGGCACCAAGAATTAAATGTAAGTGATCAACATGCTCTTGAAATGCTCTACCGCGTTTCGATCAAGGAAGTTGACAATGTATTTGGGGCTTGGGCAGAAGATTCAGGCTACTTATCCGGTTCACTACAGGGAAATGTCCTTGATGGTAGAATCCGTCGACCTTTTTCGATTACTTACAACACTTCCACTTCATTTGATTCCAATTTTTCAGCTCCAGAAGAATTGTATTTGATTGCGAGGACAATGGGAAGCAACCAAGATGCCAACATGAAATACAATTTGACATGGTCTTTTCCTGTTGATTCTGGATTCAGATATCTTGTTAGGCTTCATTTCTGTGAGATCTCCATGGAGGTAACAAAGGCCAACCAAAGGGTGTTCAAGGTTTACATCAACAACCAAACAGCAGAGGAGAGCATGGATATAGTTGCTTTGGTTGGTGCACCATTTGTTGCTTTCTACAAAGACTATGTTGTTATGGTTCCTTGGGAAAGTGAGAGGAGACTAAACATGTCGATTGCGCTTCACCCAAACATGGAATCAAAACCAACGTTTGCTGATGCCATATTGAGTGGCATAGAGATCATCAAGTTAAGTGACAATAATTTTAATCTTGCAGTTAGTTCCCCATTGATAGAGGAGCAACAAAAGAAGAAGAAAGCTCCACTTATGATTGTTCTTCTTCCTTGTACTTCAGCACTTGCTTTTGGGTTGCTTACTGCCATTTTTGTTTTTATCCATCAATCTTGGAAGAAACAAAAGAGGGAAAATTTTCAAGTACTCCCTTTAAATGCTACTAGAGAAAATGACAAAGATATGCAAGTGAAAATAACCTCAGGTCAGTGCTGCCAATTCACATTGGAAGAGATTAGCATAGCCACTAACAACTTCAATGAAGATCTAGTGATTGGGGAGGGAGGCTTTGGAAAGGTGTACAAGGGAATTATAGTAAATGATGGAGTCACTTCTTTTGCTATAAAGCGATGCAAACCGGGCTCACGTCAAGGACTCAAGGAGTTTCAAAATGAGATAAAGTTTTTCACATTTTGTCACTTGAATCTGGTGTCACTGATAGGCTTCTGCCAAGAAGACAATGAGTTGATACTTGTCTATGAATATATGGCTAATGGCAGTCTTTGTGATCATCTTTACAAGAAACAGAACCAGCCACTTACATGGCATCAGAGACTGAATATTTGTGTCGGCGCGGCAAGAGGACTACATTATTTGCATACCGGTACAAGGCAGCCGATCATTCACCGCGACATCAAGTCATCCAACATATTGTTGGATCAAAACTTGGTACCTAAGATTGCGGATTTTGGGTTGTCCAGAACCATCCCCTCCCCTTCCCACACTCACATTAGCACTCAGGTGAAGGGCACTTTGGGATACTTAGATCCTGAGTACTACAAGAGAAGAAAATTGACTGAAAAATCTGATGTCTATTCATTTGGTGTGGTTTTGTTTGAAGTGTTAAGTGCAAGACCAGCAGTGAATCATGTAGCAGAAGAAGATTATACTGAGAAGGTTGGTTTGGCTGAGTGGGCCTTGCATTGTCACCAATGTAGAAGCATTGAACAGCTAGTTGATCCTCAATTGGAAGGAAAGATCAGTTCAGAATGCTTGGTGGCATTTGTAGAAATTGGTATCCAATGCTTGAAGCATAGGAGTGTAGAACGGCCAACAATGGGAGATGTGCTTAGTAAATTGGAGGAAATCTTGTCCTTGCAGGAGAGTTTCGACGAACAAGAATTAAATTCTATTCAAATTACTCAACGTATATCTGATGATATAGAACAGTTAAATACTTGCAGGTAA 2454 0.3957 MKETHVTESGKYIVFFLYSLHLTICGSIQVPSDTIFLDCGSSGESSFNGERWIGDIGSSFLLPSYNKISSSLFVLNQDNNRVPKIPYSTTRIIHSPLNYTFSFTTPSLKFIRIYFLSTSYLNMNPSKAYFSVKVGRYTLLSGFSPFVAAQELNLAYFTKDFLVNVVEEKLNITIIPSSLVSNAFAFINGIEIFSVPSTLYFPFSKLHVPYLGHQELNVSDQHALEMLYRVSIKEVDNVFGAWAEDSGYLSGSLQGNVLDGRIRRPFSITYNTSTSFDSNFSAPEELYLIARTMGSNQDANMKYNLTWSFPVDSGFRYLVRLHFCEISMEVTKANQRVFKVYINNQTAEESMDIVALVGAPFVAFYKDYVVMVPWESERRLNMSIALHPNMESKPTFADAILSGIEIIKLSDNNFNLAVSSPLIEEQQKKKKAPLMIVLLPCTSALAFGLLTAIFVFIHQSWKKQKRENFQVLPLNATRENDKDMQVKITSGQCCQFTLEEISIATNNFNEDLVIGEGGFGKVYKGIIVNDGVTSFAIKRCKPGSRQGLKEFQNEIKFFTFCHLNLVSLIGFCQEDNELILVYEYMANGSLCDHLYKKQNQPLTWHQRLNICVGAARGLHYLHTGTRQPIIHRDIKSSNILLDQNLVPKIADFGLSRTIPSPSHTHISTQVKGTLGYLDPEYYKRRKLTEKSDVYSFGVVLFEVLSARPAVNHVAEEDYTEKVGLAEWALHCHQCRSIEQLVDPQLEGKISSECLVAFVEIGIQCLKHRSVERPTMGDVLSKLEEILSLQESFDEQELNSIQITQRISDDIEQLNTCR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61158g00003 817 ProSitePatterns Protein kinases ATP-binding region signature. 514 538 IPR017441 GO:0005524
Stsc61158g00003 817 CDD STKc_IRAK 514 785 - -
Stsc61158g00003 817 FunFam receptor-like protein kinase FERONIA 474 584 - -
Stsc61158g00003 817 Gene3D Transferase(Phosphotransferase) domain 1 585 810 - -
Stsc61158g00003 817 FunFam FERONIA receptor-like kinase 222 410 - -
Stsc61158g00003 817 SUPERFAMILY Protein kinase-like (PK-like) 486 782 IPR011009 -
Stsc61158g00003 817 ProSiteProfiles Protein kinase domain profile. 508 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61158g00003 817 PANTHER OS07G0166700 PROTEIN 493 789 IPR045272 GO:0004714|GO:0006468
Stsc61158g00003 817 Pfam Malectin-like domain 37 408 IPR024788 -
Stsc61158g00003 817 Gene3D - 34 195 - -
Stsc61158g00003 817 Gene3D - 230 410 - -
Stsc61158g00003 817 FunFam FERONIA receptor-like kinase 34 196 - -
Stsc61158g00003 817 SMART serkin_6 508 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61158g00003 817 FunFam Receptor-like protein kinase FERONIA 585 804 - -
Stsc61158g00003 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Stsc61158g00003 817 Gene3D Phosphorylase Kinase; domain 1 471 584 - -
Stsc61158g00003 817 Pfam Protein tyrosine and serine/threonine kinase 513 782 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61158g00003 Stsc-Chr61158 22192 24820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61158g00003 31 795 Receptor kinase-like Gene Family AT3G51550 42.857 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc61158g00003 Malectin_like 1.3e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61158g00003 - - gmx:100776324 994.571