Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61151g00004 ATGCTCACTAGGAACAGGATTGATGGAACAGGAGGGTTCCTCTTTTCCGACCTCTCAAAGCACACAGCTTCCACTCTCGCGACGATGATTCACCTTCGATGGAGGACAGAGCTTCAGCTTCGTCTTCGCAACTTCCTCTACACGTTAGGGCAATCTCTTCACTCAGATTCCCTCTCCTTCTCCCGCCACAAACGCCGTCTTCTTGTAAACCGCCTTTGCTTCTGCTCGTTCCGTCTCCGCCGTCTGCGCTCCATCCTCTCGCCATATTCACTTCAGCCCTTGTTGAACATGTACGGGAGAAAAGCTTGTGAGCTTGTCAAAGAATTTGCAAGCGTAGGTAAAGGCCAGCTCACACAGTACAATAGTGACCTCTTTGAACAAGTAGTTGCAGAATGCAGCCAGCACCACCTTGAGCTTCAGTCTTTGATAAGAAAAATGCAGGAAGAAGGTTTGGATGTCCAAACAGCTAGAAATGCTGACCACTATGGTGCCCTTATCCATCATCTCGCTTTAGTCCGCAATAAGCGCTGCCTAATGGCCTACGTAAATAACCGAGCTGAGATTATAAGAAGCTTGGTATGGAAGATTGGCAGTGTGCTTCCTAAAGAGATTGAGGAGAAGCTTAGTCACACAGAGGAAGAGTATTTCAACAAGTATTCTGGAGAATTGAAAAAATATATGTCAAAAATGGAATTAGACCTGACAGTGGATATGGTGCCGCCAAAAGATCCTTACATCAAAGTAAGGGTCCTTGATGACATTGGAGATGGGATTGTTCTTAGCGATAAGACTGCAAATTTTGCTCGTCATTCGATCCACTTTCTGAAGCGAACTGATGCCGAACAATTCATTTCACGGGGCTTAATGGAGGAGCTCACAGGTTGA 885 0.461 MLTRNRIDGTGGFLFSDLSKHTASTLATMIHLRWRTELQLRLRNFLYTLGQSLHSDSLSFSRHKRRLLVNRLCFCSFRLRRLRSILSPYSLQPLLNMYGRKACELVKEFASVGKGQLTQYNSDLFEQVVAECSQHHLELQSLIRKMQEEGLDVQTARNADHYGALIHHLALVRNKRCLMAYVNNRAEIIRSLVWKIGSVLPKEIEEKLSHTEEEYFNKYSGELKKYMSKMELDLTVDMVPPKDPYIKVRVLDDIGDGIVLSDKTANFARHSIHFLKRTDAEQFISRGLMEELTG 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61151g00004 294 CDD GINS_B_Psf1 244 292 - -
Stsc61151g00004 294 SUPERFAMILY GINS helical bundle-like 97 242 IPR036224 -
Stsc61151g00004 294 CDD GINS_A_psf1 99 232 IPR005339 GO:0000811|GO:0006260
Stsc61151g00004 294 PANTHER PARTNER OF SLD5 97 293 IPR005339 GO:0000811|GO:0006260
Stsc61151g00004 294 Gene3D - 97 230 - -
Stsc61151g00004 294 Pfam GINS complex protein 140 212 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61151g00004 Stsc-Chr61151 22802 26030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61151g00004 97 294 Core DNA Replication Machinery Family AT1G80190 68.159 4.34e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61151g00004 K10732 - qsa:O6P43_027860 337.806