Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61121g00005 ATGGCATTTGAAGGTGATGCCAAACTTGCCAAAGGGTTCATAGAGCTCAACAGACATGAAAACTCTCGAACCGGACGAGCCATTTACCGCCAGCCATTGCACGTTTGGGATTCATCCACTGGGGTTCTCACAGACTTCACAACCTCTTTTACATTCAGTATTGAAGGACCCGAATCTGATGATGTACTTGGTGATGGCTTTGCCTTCCACATGGCTCCAATTAGTTTCACAATTCCACCCAACTCAGGTGGTGGCAATTTTGGACTATTCAACGTCTCCACATATTTAGGCATACCCCAAAATCACATTTGTTTGGTGGAATTTGATACATCCCAAAATAAAGATTACGATCCACAAGATCTAGGGCAACATAATTCTTCTACCAAGAACCTTCTTGTGTCTTGGTCTTTCAATGGAACTAGCACCCATACTCTGACTTGTGTGATTGACCTCTCCGAAATCCTACCGGAGTATGTTACGGTCGGATTCTCAGCTGCAACTGGCCAAAACTCGATCACACAACACAAAATTCATTCTTGGGAATTCAACTCAATTCTGGATTCCACCGATTCTGCCAGAAAGAAGAGGCAAAAAAGGGTCATAGAAATTGTTGCAGTGACTTGTTCAATAGTTGCATTGATGGTTATGGTATGTGTTTGTTGGTCATTCACAATGGTCAAGAAAGGAATTGCCAAGCATCTACATGATGATGGTAACCACACAGTATCGGTCGCCAATGACTTGGAGAAAGCATCAATACTCAGAAGATTCAAGTACAAAGAATTAGTTCTAGCAAGCAATGAGTTCTCAGATGATCAAAGGCTTGGAAGTGGAGGATCTAGTCAAGTTTACAAAGGTTTTCTAAGTCACTTAGGATTTGCGGTTGCAGTGAAGAGGATTTTGACTGATATTCAAGAAGGTGAGAAAATGTTCATCAATGAGGTGAAGATAATAAGTCTCCTCATACATAGAAACTTGGTGAGATTCATAGGGTGGTGTTGCCACAACAAACAAGAGTTCTTCCTGGTCTACGAGTACATGCCTAACGGAAGCCTAGACAGTCATCTATTTGGGAATAGAAGAGCTTTGCCTTGGGATGCAAGGTATAAGATAGCTTTAGACGTGGCCACAGCACTTCATTATCTTCATGAAGATGCAGAACAATGTGTGCTTCATAGAGATATTAAGTCTGCTAATATTCTGTTGGACACAGATTTTAGCACCAAGCTTTGTGATTTTGGGATTGCCAAATTGGTCGACCCGAGATTGAAGACTCAAAGGACAGGAGTTGTAGGGACATATGGATACTTGGCTCCAGAATATCTCAATGGAGGAAGGGCTAGCAAGGAATCAGACATATATAGTTTTGGGATTGTAGCTTTGGAAATTGCATGTGGAAGGAAGACTTACCAAGATGGAGAATATCATATCCCTCTAGTAAATTGGATATGCCAACTCTATCTGAAAGGGAACATTCTAAATGGTGCTGATGAGAGTTTGAACAAGAACTTTGATGAACTTCAAATGACATGCTTGCTTGTAGTCGGACTATGGTGTACCAACCCGAATGACAGGGAAAGGCCGAAAGCAGCGCAAGTGATCAAGTTTCTTCAACTTGAATCGCCACTACCTACGCTTCCACAAGATATGCATGATCATCCTTTACAACCAACTTCGGTGACATTTAGAAATTCTTTTCAATCATCACCCATCAGCAATAGCCTTGTTAATGATGGACGTTAG 1743 0.4159 MAFEGDAKLAKGFIELNRHENSRTGRAIYRQPLHVWDSSTGVLTDFTTSFTFSIEGPESDDVLGDGFAFHMAPISFTIPPNSGGGNFGLFNVSTYLGIPQNHICLVEFDTSQNKDYDPQDLGQHNSSTKNLLVSWSFNGTSTHTLTCVIDLSEILPEYVTVGFSAATGQNSITQHKIHSWEFNSILDSTDSARKKRQKRVIEIVAVTCSIVALMVMVCVCWSFTMVKKGIAKHLHDDGNHTVSVANDLEKASILRRFKYKELVLASNEFSDDQRLGSGGSSQVYKGFLSHLGFAVAVKRILTDIQEGEKMFINEVKIISLLIHRNLVRFIGWCCHNKQEFFLVYEYMPNGSLDSHLFGNRRALPWDARYKIALDVATALHYLHEDAEQCVLHRDIKSANILLDTDFSTKLCDFGIAKLVDPRLKTQRTGVVGTYGYLAPEYLNGGRASKESDIYSFGIVALEIACGRKTYQDGEYHIPLVNWICQLYLKGNILNGADESLNKNFDELQMTCLLVVGLWCTNPNDRERPKAAQVIKFLQLESPLPTLPQDMHDHPLQPTSVTFRNSFQSSPISNSLVNDGR 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61121g00005 580 CDD lectin_legume_LecRK_Arcelin_ConA 3 186 IPR001220 GO:0030246
Stsc61121g00005 580 PANTHER - 21 541 - -
Stsc61121g00005 580 ProSitePatterns Legume lectins alpha-chain signature. 155 164 IPR000985 -
Stsc61121g00005 580 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 186 IPR013320 -
Stsc61121g00005 580 ProSitePatterns Protein kinases ATP-binding region signature. 275 298 IPR017441 GO:0005524
Stsc61121g00005 580 Gene3D Transferase(Phosphotransferase) domain 1 347 554 - -
Stsc61121g00005 580 Gene3D - 1 123 - -
Stsc61121g00005 580 Pfam Protein kinase domain 270 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61121g00005 580 FunFam L-type lectin-domain containing receptor kinase IX.1 347 547 - -
Stsc61121g00005 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Stsc61121g00005 580 Gene3D Phosphorylase Kinase; domain 1 253 346 - -
Stsc61121g00005 580 ProSiteProfiles Protein kinase domain profile. 269 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61121g00005 580 SMART serkin_6 269 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61121g00005 580 SUPERFAMILY Protein kinase-like (PK-like) 253 561 IPR011009 -
Stsc61121g00005 580 Gene3D - 124 211 - -
Stsc61121g00005 580 Pfam Legume lectin domain 2 119 IPR001220 GO:0030246
Stsc61121g00005 580 Pfam Legume lectin domain 124 194 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61121g00005 Stsc-Chr61121 24061 25899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61121g00005 1 550 Receptor kinase-like Gene Family AT5G10530 41.582 8.26e-150 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc61121g00005 Pkinase 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61121g00005 - - gmx:102662919 652.514