Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61121g00001 ATGACCGTTCAGCGTGATTTACCTGCTGAGGCGCCACTGATGGACAAGAACGCTGCTTCGCGCGCAGTCGATTGCTCTACCGCATCTTGCTTTGAATTCGATGATGGAGAGTCACCTGAGGATGAGAGTGAGGAGTTGAGCAACAATTGGGGTCTTGAATTATCAGATTATTTAGCAATTGATGATGATACTCAATGGCTTGATGATGAGTCTTTTGTTTCTCAGCATAATCTTAATCTTCAAAACCAGCAGGTATTTCATCATCAAGCTATTCATCAAGTTGGAGAAGGTAGCACCACCAACTTTGAGGGATCTTCAACCAATATAAGCAGTGGCCATGAGAGGAGGGAAGCTAAACATAGATATGCAATCAAAACAAAATCAGATATTGAAGTGCTGGATGATGGATACAAGTGGAGGAAATATGGAAAAAAGATGGTCAAGGATAGCCCCAATCCAAGGAATTATTATAGGTGTTCAGTGGAAGGATGCTCAGTGAAAAAGAGAATAGAGAGGGATAGGGATGATCCAAGGTATGTCATAACAACCTATGAAGGCATTCACATTCATCATCCTTCTTCTTCTCGCTACTAG 594 0.4192 MTVQRDLPAEAPLMDKNAASRAVDCSTASCFEFDDGESPEDESEELSNNWGLELSDYLAIDDDTQWLDDESFVSQHNLNLQNQQVFHHQAIHQVGEGSTTNFEGSSTNISSGHERREAKHRYAIKTKSDIEVLDDGYKWRKYGKKMVKDSPNPRNYYRCSVEGCSVKKRIERDRDDPRYVITTYEGIHIHHPSSSRY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61121g00001 197 MobiDBLite consensus disorder prediction 97 118 - -
Stsc61121g00001 197 SMART WRKY_cls 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc61121g00001 197 ProSiteProfiles WRKY domain profile. 128 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc61121g00001 197 FunFam WRKY transcription factor 57 119 193 - -
Stsc61121g00001 197 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 194 IPR044810 GO:0003700
Stsc61121g00001 197 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc61121g00001 197 SUPERFAMILY WRKY DNA-binding domain 126 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc61121g00001 197 Gene3D WRKY domain 120 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61121g00001 Stsc-Chr61121 2269 6535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61121g00001 121 190 WRKY Transcription Factor Family AT5G26170 77.143 3.61e-38 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc61121g00001 WRKY 8.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61121g00001 - - gmx:100819462 186.422