Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61114g00001 ATGGAGGACAAAGAAGACGACAACAATAACAATAACAACCAAGATCATCATAATAACCACCCAAAAGAAGAATCACTAGTAACAAGAAAACACAATACTATTGGAGGCGGAAGCAGCGGCGGCGACAGCAGGCTGAAGAGAGATGAGTGGAGTGAAGGAGCAGTTTCCACTCTTCTTGAGGCATACGAATCAAAATGGGTTCTGAGAAACAGAGCAAAACTCAAAGGCCATGACTGGGAAGACGTTGCAAGACACGTGTCATCACGAGCCAACTCCACCAAATCACCAAAGACACAGACACAGTGTAAGAACAAGATTGAATCCATGAAGAAAAGGTACAGATCAGAATCTGCTACCGCTGATGCCTCATCTTGGCCGTTATATTCACGCCTTGATCTTCTCTTGCGTGGGACCGGGCCTGTATCTGGGCCCGTGCCCTCCACGCTGGCACCAGCACTGCCACCGCCAGTGACGGTGGCAGTAGCTGCAGCTGCAGCGACTGGGTCTCATCAGTCGCTGCACTTTAGCAATAACCAACCGTTGATGCTGTTGGAGCCGCCGCCGTCATCGCTGGCTATGTCGCAAGCTCTCCATCAACCACCGCCGCCTCCTGGTGGTCCTGCTGCTCCTCCACCACTTGCCACCACCGCGCAAAACTCGCATGGATCGAATGGCGTTGAAAGATTGATAGCTAAGGAAGATGGATTAGGAACTAAGTCATCAGATCATGTGTCTAACAAGAATCCATTAGACACTGATAGCAGCACACCAGCACTCTACAGTGAAAAGGATAAGCTAAGATGCAACAAGAGGAAGATGAAGATGGAGAGCAACAAGCAGCAGCGGCGACGGAAGGAGGACATGGAGATAGCAGGAAGCATCAGGTGGCTTGCTGAAGTTGTGGTGAGGTCAGAGCAAACAAGAATGGACACAATGAAGGAGATTGAAAAGATGAGGGTAGAAGCCGAGGCCAAGCGTGGCGAAATGGATCTCAAGAGGACTGAAATCATTGCCAATACGCAGTTAGAGATTGCTCGGATCTTTGCGAGCGTCAATAACAAAGGCGTGGATTCATCGTTGAGAATCGGTAGAAACTAA 1098 0.4945 MEDKEDDNNNNNNQDHHNNHPKEESLVTRKHNTIGGGSSGGDSRLKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATADASSWPLYSRLDLLLRGTGPVSGPVPSTLAPALPPPVTVAVAAAAATGSHQSLHFSNNQPLMLLEPPPSSLAMSQALHQPPPPPGGPAAPPPLATTAQNSHGSNGVERLIAKEDGLGTKSSDHVSNKNPLDTDSSTPALYSEKDKLRCNKRKMKMESNKQQRRRKEDMEIAGSIRWLAEVVVRSEQTRMDTMKEIEKMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61114g00001 365 MobiDBLite consensus disorder prediction 1 49 - -
Stsc61114g00001 365 Coils Coil 263 283 - -
Stsc61114g00001 365 Gene3D - 50 115 - -
Stsc61114g00001 365 MobiDBLite consensus disorder prediction 1 29 - -
Stsc61114g00001 365 MobiDBLite consensus disorder prediction 241 257 - -
Stsc61114g00001 365 MobiDBLite consensus disorder prediction 197 211 - -
Stsc61114g00001 365 MobiDBLite consensus disorder prediction 88 103 - -
Stsc61114g00001 365 MobiDBLite consensus disorder prediction 179 222 - -
Stsc61114g00001 365 MobiDBLite consensus disorder prediction 85 105 - -
Stsc61114g00001 365 Pfam Myb/SANT-like DNA-binding domain 47 133 IPR044822 -
Stsc61114g00001 365 MobiDBLite consensus disorder prediction 237 286 - -
Stsc61114g00001 365 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 351 IPR044823 -
Stsc61114g00001 365 FunFam Trihelix transcription factor ASIL2 50 115 - -
Stsc61114g00001 365 MobiDBLite consensus disorder prediction 258 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61114g00001 Stsc-Chr61114 11517 14620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61114g00001 32 347 Trihelix Transcription Factor Family AT3G14180 24.148 1.13e-17 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc61114g00001 Myb_DNA-bind_4 8.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61114g00001 - - adu:107471869 553.518