Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61108g00006 ATGAATACTCTTTTCTTGATTATCTCATTTTGCTTATGCTTTCAAACCCATGCATCATCTTCCTCCGATTCTTCCCAATCAAACAATCCATTCCCCAAAGAAGCTCATCCCACTAAATCAGGCTACCTCCCCGTCAACACTTCCTCTTCTTCCGCCATCTTCTACGCTTTCTATGAAGCTCAGAACTCAACCTTACCTCTCTCCAAAACCCCACTTCTCATTTGGCTCCCAGGTGGCCCTGGAAGTTCCTCCATGATTGGCAACTTCTATGAGGTTGGACCATGGCGTATCACACAATCCATCACCCTTGAACCCAACCCTGCTTCTTGGAACAACTACTTCGGCCTTCTCTTTCTTGATAACCCCATCGGCACTGGATTCAGCATAGCCTCATCGCTCCAAGAAATCCCGAGAGATCAACAAGGTATTGCCAGACACCTTTATGTTGCCATTACAAGGTTTCTTCGACTTGATCCTGTTTACAAACACCGCCCTATTTATATCATTGGCCAAAGCTACGGCGGAAAGTTTGCCTCTACAACTGGTTATTATATATTGAAAAGAAATAAACAGTTGCGTGCTCCTCAAAGAGTTAATTTGGTTGGTGTGGCTATTGGGGATGGTATGATTGAGCCTGTAACCCAATTAGGCACAGTACCTGCTAATGCTTATTACTTGGGTTTGATCAATGAGAAGCAAAAGAATGAGTTGGAGAAAGATCAATTGGAAGTAGTTAAGTTGACAGAGACTCTGCAATGGGGCAAAGCAACGGATGCAGGGGGAAGACTCACGGCCAAGTTGCAAAACATGACAGGGTTGGCTACTTTGTATGGTTACCCATGGAAAGATCAACCTTATCACTATCAAGACTGGGTTACTCAATTCTTGAATATAGCTGAGGTGAAGAAGGCATTGGGAGTGAACGAATCGCAAGTGTTTAAAGCAAGCAGCATCGAAGTTGGGGCTGCATTACATGATGATATACCGAAGAGTGTGAAGTTTATGGTGGAGGAGTTGTTGAAGAGCAACCGTATCAGGGTGTTGATTGACCAAGGTCAATATGATTTGGTTGCTGGTCCGGTGCATACAGAGGCATGGGTGAAGAACATGAAGTGGGAAGGGATTGAGGAGTATCTGAATGCAGAGAGGAAGATATGGAAGGTGAATGGAGAGCTTGCTGGGTATGTCCAACAATGGAAATCACTCACTAATGTTGTGGTGTTAGGAGGTGGACATATTATGCCTGCTGACCAGCCTGTTAATGCTCAGGCAATGATTCAAGATTGGATCTTGCAAAGGG 1300 0.4454 MNTLFLIISFCLCFQTHASSSSDSSQSNNPFPKEAHPTKSGYLPVNTSSSSAIFYAFYEAQNSTLPLSKTPLLIWLPGGPGSSSMIGNFYEVGPWRITQSITLEPNPASWNNYFGLLFLDNPIGTGFSIASSLQEIPRDQQGIARHLYVAITRFLRLDPVYKHRPIYIIGQSYGGKFASTTGYYILKRNKQLRAPQRVNLVGVAIGDGMIEPVTQLGTVPANAYYLGLINEKQKNELEKDQLEVVKLTETLQWGKATDAGGRLTAKLQNMTGLATLYGYPWKDQPYHYQDWVTQFLNIAEVKKALGVNESQVFKASSIEVGAALHDDIPKSVKFMVEELLKSNRIRVLIDQGQYDLVAGPVHTEAWVKNMKWEGIEEYLNAERKIWKVNGELAGYVQQWKSLTNVVVLGGGHIMPADQPVNAQAMIQDWILQR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61108g00006 433 Coils Coil 230 250 - -
Stsc61108g00006 433 MobiDBLite consensus disorder prediction 20 40 - -
Stsc61108g00006 433 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 419 IPR001563 GO:0004185|GO:0006508
Stsc61108g00006 433 MobiDBLite consensus disorder prediction 20 34 - -
Stsc61108g00006 433 Pfam Serine carboxypeptidase 37 431 IPR001563 GO:0004185|GO:0006508
Stsc61108g00006 433 SUPERFAMILY alpha/beta-Hydrolases 37 430 IPR029058 -
Stsc61108g00006 433 Gene3D alpha/beta hydrolase 15 433 IPR029058 -
Stsc61108g00006 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 106 118 IPR001563 GO:0004185|GO:0006508
Stsc61108g00006 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 402 415 IPR001563 GO:0004185|GO:0006508
Stsc61108g00006 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 154 179 IPR001563 GO:0004185|GO:0006508
Stsc61108g00006 433 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 129 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61108g00006 Stsc-Chr61108 25604 26903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61108g00006 297 430 Calmodulin-binding Proteins AT2G22960 25.926 8.14e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61108g00006 K09645 - gmx:100780822 561.222