Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61104g00003 ATGGAGAAAGCCTTAATCCATTCAAAGATTTGTCCTGAGGATAAGAAGAAGCTAAATTCTGTAATTGATAAGGCTAGAACTGTACTTGATGATGAAAACCCTAGCACACACGATCACACGCTTAGACTTTACGTATTCTCTTCCTACGTGGGTGGGTTCGTCGTCGCCGGCGCCGGAGACGGAGAAGCACGCGTCGTGCTTTACTCGGGGACATCGCGATTGCAGCTTGCTGTGAATCAAAGGACGATGGCTAGAAAGTACAAAGGACATGCAGTGGGAATTGAACTTGGCACCACATGCTCTTGTGTTGGCGTATGGCAGGAGCAACATTGTCGTGTGGAGATCATTCACAATGATCAGGGCAACAGAACAACACCTTCCTGCGTTGCTTTCACTCAGAATCAAAGGTTTATTGGAGATGCTGCTAAGAACCAGGCTGCAGCTAACCCAACTAACACTGTCTTTGATGCTAAGAGATTGATCGGTAGAAAATATAGTGATCCGATTGTCAAGAATGATATCCTGACGTGGCCATTTAAGGTCACTGCTGGTGCTGATGATAAACCAATGATTGTTGTTACTTACAAGGATCGAGAGAAGCACTTTTCTGCGGAAGAAATTTCATCTATGGTTCTCACTAGGATGCGAGAGATTGCAGAGGCATACTTAGAGGCACCTGTTTGTAATGCTGTTATTACAGTACCTGCTTATTTCAATGGCTCTCAGCGCGAAGCTACCAGAGATGCTGGCACCATTGCAGGTCTCAACGTGATGAGAATAATCAACGAGCCAACAGCTGCAGCCATTGCATATGGCCTTGACAAAAGATCTGGTTGCGCCAAGGAGCGTAATGTGTTCATCTTTGATCTTGGTGGGGGTACATTTGATGTTTCTCTCCTTACTATTAAGGACAAGGTCTTCAAAGTTAAGGCTACTGCTGGAAACACTCACCTCGGTGGAATGGATTTTGATAACAGAGTAGTGAGTTACTTTGTTAAGGAATTCAACAGGAAGTACAATGTTGACATTAATGGCAATCCCAGAGCCTTAAGGAGATTGAGAACTGCTAGTGAGAAGGCTAAGAGGACCTTATCTTATGCAGTAACAGCCTCCATTGAATTAGATGCTTTCTTTAACGGAATTGACTTCTATTCATCAATTACACGTGCTAGATTTGAAGAACTTAATATGGACCTCTTTAGGGAGTGCGTGGAAACGGTAGATGAATGCTTGACTGATGCGAAAATGGACAAGGCAAGTGTACATGATGTGGTGCTTGTTGGTGGCTCTTCAAGGATTCCCAAAGTGCAGGAGTTGTTGCAAGAATTTTTCGAAGGAAAGAAGCTTTGTAAGAGCATCAATCCTGACGAAGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTTTGTTGAATGGAGGCACTAAGAGTAGTGTCCCAGATTTGGTGCTGCAGGATGTCACTCCTCTGTCTCTTGGTGTAAGGACAATTGGAGATGTCATGACTGTTGTAATTCCGAGGAATACTACCATTCCAGTAAAGAAATCACGTAATCTCTTGACGACTGAAGATAACCTAGTGTCTATGGTGCAAAGAATTTATGAAGGTGAAAGGGCAAGAGCCAGCGATAACAACTTGCTTGGTAAATTTACACTTACAGGAATCCCTCCTGCTCCTAAAGGCCATCCTGTATCAATATGCTTTGATTTAGATGCTGATGGCAGCCTTTGTGTAACTTGTGAGGAGAAGACCACTGGCAATAAAAACCAGATTACCATAAAACTTGATGAAGGAAGACTTTCGGAGGCAGAAAAAGAAAGGCTCATTGCGGAAGCTGAGATATATAAGGTTGAAGATGAGAAGTTTATGAAGAAAGCTAAAGCAATACGTGCTTTGGATGATTATGTTTATGACATGAAGAAAACCTTAAAGGGTTCTGAGCTTTGTCCTGAGGATATGGAGAAGCTAAATTGTGCAATTGATAAGGCTAGAACTCTGCTTGATGATGGTAACAAGGAGAAGAAAGAAATTGATGTGTTCGTGGAGCATCTTAAAGAAGCTAAGCTCATTTTTGAGCTCATTAAAGCTAAGATTGGGAAACAGAACGACACCTGCTTTTACTCAAAATCAAAGACTAATTGGTGGAGTTGCTGCTTCTTACCCAACTAA 2166 0.4271 MEKALIHSKICPEDKKKLNSVIDKARTVLDDENPSTHDHTLRLYVFSSYVGGFVVAGAGDGEARVVLYSGTSRLQLAVNQRTMARKYKGHAVGIELGTTCSCVGVWQEQHCRVEIIHNDQGNRTTPSCVAFTQNQRFIGDAAKNQAAANPTNTVFDAKRLIGRKYSDPIVKNDILTWPFKVTAGADDKPMIVVTYKDREKHFSAEEISSMVLTRMREIAEAYLEAPVCNAVITVPAYFNGSQREATRDAGTIAGLNVMRIINEPTAAAIAYGLDKRSGCAKERNVFIFDLGGGTFDVSLLTIKDKVFKVKATAGNTHLGGMDFDNRVVSYFVKEFNRKYNVDINGNPRALRRLRTASEKAKRTLSYAVTASIELDAFFNGIDFYSSITRARFEELNMDLFRECVETVDECLTDAKMDKASVHDVVLVGGSSRIPKVQELLQEFFEGKKLCKSINPDEAVAYGAAVQAALLNGGTKSSVPDLVLQDVTPLSLGVRTIGDVMTVVIPRNTTIPVKKSRNLLTTEDNLVSMVQRIYEGERARASDNNLLGKFTLTGIPPAPKGHPVSICFDLDADGSLCVTCEEKTTGNKNQITIKLDEGRLSEAEKERLIAEAEIYKVEDEKFMKKAKAIRALDDYVYDMKKTLKGSELCPEDMEKLNCAIDKARTLLDDGNKEKKEIDVFVEHLKEAKLIFELIKAKIGKQNDTCFYSKSKTNWWSCCFLPN 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61104g00003 721 ProSitePatterns Heat shock hsp70 proteins family signature 3. 424 438 IPR018181 -
Stsc61104g00003 721 Coils Coil 652 672 - -
Stsc61104g00003 721 FunFam heat shock 70 kDa protein-like 155 210 - -
Stsc61104g00003 721 FunFam Heat shock 70 kDa 319 402 - -
Stsc61104g00003 721 FunFam Heat shock 70 kDa protein 474 628 - -
Stsc61104g00003 721 Gene3D - 276 450 - -
Stsc61104g00003 721 SUPERFAMILY Actin-like ATPase domain 91 275 IPR043129 -
Stsc61104g00003 721 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 477 628 IPR029047 -
Stsc61104g00003 721 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 627 699 IPR029048 -
Stsc61104g00003 721 FunFam Heat shock protein 70 92 286 - -
Stsc61104g00003 721 Gene3D - 92 467 - -
Stsc61104g00003 721 PANTHER HEAT SHOCK PROTEIN 70KDA 91 661 IPR013126 GO:0005524|GO:0140662
Stsc61104g00003 721 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 468 649 IPR029047 -
Stsc61104g00003 721 PRINTS 70kDa heat shock protein signature 90 103 - -
Stsc61104g00003 721 PRINTS 70kDa heat shock protein signature 120 132 - -
Stsc61104g00003 721 PRINTS 70kDa heat shock protein signature 293 303 - -
Stsc61104g00003 721 PRINTS 70kDa heat shock protein signature 230 250 - -
Stsc61104g00003 721 PRINTS 70kDa heat shock protein signature 453 473 - -
Stsc61104g00003 721 PRINTS 70kDa heat shock protein signature 142 150 - -
Stsc61104g00003 721 PRINTS 70kDa heat shock protein signature 480 499 - -
Stsc61104g00003 721 PRINTS 70kDa heat shock protein signature 421 437 - -
Stsc61104g00003 721 PRINTS 70kDa heat shock protein signature 560 576 - -
Stsc61104g00003 721 ProSitePatterns Heat shock hsp70 proteins family signature 2. 287 300 IPR018181 -
Stsc61104g00003 721 Gene3D - 155 210 - -
Stsc61104g00003 721 SUPERFAMILY Actin-like ATPase domain 281 471 IPR043129 -
Stsc61104g00003 721 Pfam Hsp70 protein 91 685 IPR013126 GO:0005524|GO:0140662
Stsc61104g00003 721 Gene3D Actin; Chain A, domain 4 319 402 - -
Stsc61104g00003 721 Coils Coil 599 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61104g00003 Stsc-Chr61104 16608 24283 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61104g00003 83 697 Calmodulin-binding Proteins AT3G12580 65.806 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61104g00003 K03283 - gmx:102667578 849.736