Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61104g00002 ATGGCTAGAAAGTACAAAGGACATGCAGTTGGAATTGACCTTGGCTCGACATACTCTTGTGTTGGCGTATGGCAGGAGCAACATTGTCGTGTTGAGATCATTCATAATGATCAGGGCAACAGAACAACACCTTCCTCCGTTGCTTTCACTCAGAATCAATGGTTTATTGGAGATGCTGCTAAGAACCAGGCAGCTGCTAACCCAACTAACACTGTCTTTGGTCGATGGCGAGAAAGTATGAAGGACATGCAGTGGGAATCGACCTTGGCACAACATACTCTTGTGTTGCCGTATGGCAGGAACAACAATGTCGTGTTGAGATCATTCATAATGACCAGGGAAACAAAACAACACCTTCATACTCTTGCTATTACTGCTGCTTTGTTGAATGGAGGCACTAAGAGTATTGTCCCAGACTTGGTGCTGCAGGATGTTACTCCTCTGTCCCTTGGCCAAGCGAAAAGACGAGATGTCATGAGTGTTGTGATTCCTATTAGAGAAACCTCAAGCTTCTGCTCCACTACAACAGCTTCTGCCTCTGTCACAACAACTTCTGTCTGTCTCAATAACCACTGCTCCACCTCAACAACCAACATCTTCTGCTCCATCTAA 612 0.4542 MARKYKGHAVGIDLGSTYSCVGVWQEQHCRVEIIHNDQGNRTTPSSVAFTQNQWFIGDAAKNQAAANPTNTVFGRWRESMKDMQWESTLAQHTLVLPYGRNNNVVLRSFIMTRETKQHLHTLAITAALLNGGTKSIVPDLVLQDVTPLSLGQAKRRDVMSVVIPIRETSSFCSTTTASASVTTTSVCLNNHCSTSTTNIFCSI 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61104g00002 203 Gene3D - 1 105 - -
Stsc61104g00002 203 FunFam heat shock 70 kDa protein-like 3 196 - -
Stsc61104g00002 203 SUPERFAMILY Actin-like ATPase domain 9 85 IPR043129 -
Stsc61104g00002 203 PANTHER HEAT SHOCK PROTEIN 70KDA 9 77 IPR013126 GO:0005524|GO:0140662
Stsc61104g00002 203 PRINTS 70kDa heat shock protein signature 8 21 - -
Stsc61104g00002 203 PRINTS 70kDa heat shock protein signature 38 50 - -
Stsc61104g00002 203 PRINTS 70kDa heat shock protein signature 60 68 - -
Stsc61104g00002 203 Pfam Hsp70 protein 9 129 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61104g00002 Stsc-Chr61104 9989 11002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61104g00002 1 73 Calmodulin-binding Proteins AT3G12580 75.342 8.25e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61104g00002 K03283 - lja:Lj0g3v0174969.1 124.02