Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61104g00001 ATGCAAAAATGGACAAGGCAAAGTGTACATGATGTGGTGCTTGTTGGTGGCTCTTCTAGGATTCCCAAAGTGCAGGAGTTGTTGCAAGAATTTTTCAAAGGAAAGGAGCTTTGTAAGAGCATCAATCCTGATGAAGCTGTTGCTTATGGCGCAGCTGTTACAGCTGCTTTGTTGAATGGAGGCACCAAGAGTACTGCCCCAGACTTGGTGCTGCAGGATGTTACTCCTCTGTCCCTTGGTCAAGCGGTAATAGGAGATGTCATGAGCGTTGTAATTCCAAGGAATACTAACATTCCTGTAAAGAAGTCAGCAACCTTTTACACGGCCGAAGACAACCAATCATCTGTGCTTAAGGAGATTTATGAGGGTGAAAGGGCAAGAGCCAGTGATAACAACTTGCTCGGTCGATTTAAACTTTCAGGAATCCGTCCTGCTCCTAAAGGCCATCCTATATTGACATGCTTTGAGTTAGATGCTGATGGCATCCTTTGTGTAACTGCTGAGGAAAAGACCACTGGTAATAAAAAACAGATTACCATAACAAATGATAAAGGAAAATTGTCAGAGGAAGAAATCGAAAGGCTCGTTGAGGAAGCCCAGAGATTCAAGATTGAAGATGAGAAGTTTCTTGAGAAAGCTACTGCAATACGTGCTTTGGATGATTATGTCTATGACATGGAGAAAGCCTTAATCCGTTCAAAGCTTTGTCCTGAGGATAAGAAGAAGCTAAATTCTGCAATTGATAAGGTTAGAACTCTGCTTGATGATGGTAACAAGGAGAAGAAAGAAATTCAAGTGTTTGTGGAGTATCTTAACGAAGCTAAGCTCATTTTTGAATCCATTTTAGCTAAGACTAATTAG 861 0.4135 MQKWTRQSVHDVVLVGGSSRIPKVQELLQEFFKGKELCKSINPDEAVAYGAAVTAALLNGGTKSTAPDLVLQDVTPLSLGQAVIGDVMSVVIPRNTNIPVKKSATFYTAEDNQSSVLKEIYEGERARASDNNLLGRFKLSGIRPAPKGHPILTCFELDADGILCVTAEEKTTGNKKQITITNDKGKLSEEEIERLVEEAQRFKIEDEKFLEKATAIRALDDYVYDMEKALIRSKLCPEDKKKLNSAIDKVRTLLDDGNKEKKEIQVFVEYLNEAKLIFESILAKTN 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61104g00001 286 PRINTS 70kDa heat shock protein signature 41 61 - -
Stsc61104g00001 286 PRINTS 70kDa heat shock protein signature 9 25 - -
Stsc61104g00001 286 PRINTS 70kDa heat shock protein signature 68 87 - -
Stsc61104g00001 286 PRINTS 70kDa heat shock protein signature 148 164 - -
Stsc61104g00001 286 Gene3D - 3 38 - -
Stsc61104g00001 286 FunFam Heat shock 70 kDa protein 62 216 - -
Stsc61104g00001 286 ProSitePatterns Heat shock hsp70 proteins family signature 3. 12 26 IPR018181 -
Stsc61104g00001 286 Gene3D - 217 286 IPR029048 -
Stsc61104g00001 286 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 216 263 IPR029048 -
Stsc61104g00001 286 Pfam Hsp70 protein 5 272 IPR013126 GO:0005524|GO:0140662
Stsc61104g00001 286 PANTHER HEAT SHOCK PROTEIN 70KDA 4 248 IPR013126 GO:0005524|GO:0140662
Stsc61104g00001 286 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 64 216 IPR029047 -
Stsc61104g00001 286 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 67 217 IPR029047 -
Stsc61104g00001 286 Gene3D - 39 56 - -
Stsc61104g00001 286 Coils Coil 185 205 - -
Stsc61104g00001 286 SUPERFAMILY Actin-like ATPase domain 6 58 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61104g00001 Stsc-Chr61104 6667 7527 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61104g00001 3 284 Calmodulin-binding Proteins AT3G12580 57.491 1.59e-102 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61104g00001 K03283 - gmx:102667578 318.161