Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61087g00001 ATGGAAAATGCTGGGCGCTGGGAGCAGAACATACTTATCAACGAGCTAGTTCAGGGGATGGAGGTAGCAAGAAGGTTGAAGGCAGACCTGAATGCGCCATATCCAGCTGACACAAAAGATTTATTGCTGCAGAGGATATTATCTTCATATGAAAAAGCTTTGTTAATTCTAAGATGGAATGCATCGACTTCCGAGTCCCAGAACATGACTCAAGCAACAGCAACAGCAACAGCAACCTTGTTACCAGAGTCACCAATATCTATCAGCGCAAGTCCCCTGAGGGAGGACAGGGATCATAATCAAGAGTTTAAACATGATTCAAAGAAAAGAAAGACAATGGACAAATGGGTGGATCAAGTGAGAGTGAGCTTTGAGAGTGGCCTTGAAGGACCACATGAAGATGGCTACAACTGGAGAAAATATGGACAGAAAGATATCCTTGGTGCCAAATATCCCAGAAGTTATTATAGGTGCACCTTCCGGAACACTCAGGGTTGCTGGGCCACAAAGCAAGTACAGAGATCAGATGAAGATCCTACCATATTTGACATAACTTACAAAGGAAGGCATACCTGTTCTCAGGGAAACAAAGCTGTTGCTCAACCAAAATCGCCAGACAAACATGATAAACTGCAATGTCATAGTAACGAAATTCAGCATAGACATACATCAGAAGAAAGCCTGACAACTTTTGGGACCATCATGACAGTTAAAAGAGATATGGTGGGAAATGGAGAAATGGAATATCCTTTCACTTTCCCTTCAACATCATTTGGAAGCATTGCACAAGAAAGCCACAGCTTGATTCCTTCAGCCCCGGAGAACGATTCGTTCTTGAGCAGCCATTTCCAAACTCACTTATTATATCCCAGCATGCAAGAATTTAAATACCTGCCATCTATGCCTTTCCAGATGAATGAGCTTGATGGGATCTATAATAGGCCACTTTCAGAATCAGATATTACTGAGATAATTTCCACCAACACATCCACCACGAATTCTCCAGTTCCGGAGTTCAATTTCTCACTTGATCCAGTGGATATCGATCCAAATTTCCCTATGAATAGCCTGGATTTTTCTCCTAGAGAACTTAACAATAAGAACATGTAG 1110 0.4198 MENAGRWEQNILINELVQGMEVARRLKADLNAPYPADTKDLLLQRILSSYEKALLILRWNASTSESQNMTQATATATATLLPESPISISASPLREDRDHNQEFKHDSKKRKTMDKWVDQVRVSFESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYKGRHTCSQGNKAVAQPKSPDKHDKLQCHSNEIQHRHTSEESLTTFGTIMTVKRDMVGNGEMEYPFTFPSTSFGSIAQESHSLIPSAPENDSFLSSHFQTHLLYPSMQEFKYLPSMPFQMNELDGIYNRPLSESDITEIISTNTSTTNSPVPEFNFSLDPVDIDPNFPMNSLDFSPRELNNKNM 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61087g00001 369 MobiDBLite consensus disorder prediction 89 110 - -
Stsc61087g00001 369 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc61087g00001 369 MobiDBLite consensus disorder prediction 92 110 - -
Stsc61087g00001 369 ProSiteProfiles WRKY domain profile. 127 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc61087g00001 369 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 6 300 IPR044810 GO:0003700
Stsc61087g00001 369 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc61087g00001 369 Pfam WRKY DNA -binding domain 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc61087g00001 369 FunFam WRKY transcription factor 53 118 195 - -
Stsc61087g00001 369 SUPERFAMILY WRKY DNA-binding domain 131 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61087g00001 Stsc-Chr61087 2093 4206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61087g00001 7 353 WRKY Transcription Factor Family AT4G11070 36.620 1.19e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc61087g00001 WRKY 8.8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61087g00001 - - adu:107480050 652.514