Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61074g00008 ATGGCCGCAAAACTTGAAGGTGGAGCATATCTATCTTCTTTTGTTGATGCTATTTCAGAGAAGCTGTCTTCATTACTTGAACATGACTTTGTCCTCGAAGTAGACGACTCTGCCCCGGAGTTGCTTCAAAGGTTGGATGATTGTCTGTGTGATGTTGGACCTGTGCTTGATGATGCTGAGCTGAAGCAGTTCAATGACAAGAGAGTGAAGAAGTGGCTTGATGATCTCCAAGATGCTCTCTATTTAACTGATGACTTGGTGGATGAACTCTCCACTAAAGCTGCCACTGCCACTCCAACAGATCCAGGTAACTCTTATGACTGGTCTCACCCTGTTGATTCAATTATTCATGATAGCGGTGTCACTTTCATCAAAAAAATAGTTGGCAAACTAGAGTCTGTTGTAGGACGAAAAGGTAAACTCGGTCTGGAGAAGGGTGCTAAGGTGGACTTCTCGTCATGGAGAATTCCATCTACATCTCTCGTTATTAGTTCTGACATATATGGTCGGGACAATGACAAGGAGAACATAATCAAATTGCTGTTAGATGATACCTCATGTGATGTTGAATCACCTGTGACTGTGATTCCCATTGTGGGTATGGGTGGGATAGGAAAAACTACTTTGGCTCAACTGGTTTACAATGACGACAGAGTCGAGGAGAAGTTTGGCACTAGAGCATGGGTGTGTGTTGCTGAAAATCCTGACCCTATTCATGTTACAAGGACAATAATAGGGGCAATAGATTCTTCTCCCTGTGATGTGAATCATTTTGATTCACTTCAGACTCATCTGAAAGAAAAGTTGTCTGGAAAGACATTTTTAGTTGTTTTAGATGATGTCTGGCATGATCAAAGAGACATGTGGGAGGATTTTTTAAAACCATTTCGCTATGGGAATGGTGGAAGTAAGATTCTCTTAACAACTCGTATTGAAAAAGTTGCTTCTGTGTTCGCTGCTAACAATCTACATTATCGAATAAGTTTATTGTCGGATGAAGATTGTTGGTCGGTGTTTCTGAAGCATTCATCTATTTCTACTAATTCTAAACAATATGCAACTCTGGAGCCTATTGGTAGAAAAATTGTTGAAAAGTGTAAGGGGTTACCTTTGGCTGTTAAGACACTTGGGGGTTTATTGCGCAATAAATATAATGAAGGAGAATGGGAGAATGTACTTGAAAGTGAAATTTGGGAACTCCGGGAAGATGAAAGTAATATTGTTCCTGCATTGAGAGTTAGTTATCACTATCTCCCCTCACATTTAAAACGTTGTTTTGTTTATTGCTCATTATATCCAGAAGATTATGAATTTGACAAAGACGAATTAGTTTTGTTGTGGATGGCTGAAGATCTTTTACAACCAAAGGGAAACAACACATTAGAAAATACTGGCCTTGCATATTTTGATGAATTAGTTGCAAGGTCATTTTTTCAATCTTCCAGTACTAAGAGAGAGTTATTTGTAATGCATGACCTCATGCATGATCTAGCAACATTTTTTGCTGGAAAATTCTATGTCAGACTCAAAGATTTTGACAATCAACACAAAATAGATGGCAAAACTCGTCATTTGTCATATGCTGCAAAATATAAGGATAGCGACAAATTATTTCAAGAGACCTACAATGGAGCAATATACATAAGAACACTTTTAGATTTTCCTCTATCTCAATGTGATCAATCAATTGATACTGAATGCAATCCTTGGCTCTTACAACAACAACTAGGTTGTTTAAGAGTTTTGACATGTTCTTACTATTTTAGACACTCATTATCTGATTCAATAGGTGAATTGATTTATTTGCGTTATTTGAATCTCTCTGACTCACATATTGTGAGATTGTCTGAGTCAATATGTAAATTATACAATCTCCAAACTTTGAAGTTGAGGAATTCTTATATGCTAGAGATGCTTCCCAGCAGCATGCAAGATCTTGTGAACCTGCGCCACCTTGATATTCAAAATGTTTTTGCTTTGAAGGAGATGCCGAACGAAATGAGTAAGTTAATGCATCTACAGTTCTTAAGTGATTATAAAGTCGGTGAGCATGAACGGAATGGGATAAGAGAATTGGGAACAATGGACAATCTCCATGGCTCATTATGCATTTCCAAGCTGGAGAAGGTCAAGAATAGTGGTGAAGCTTTGGAGGCAAAGATGGGTAACAAGAAGCACATCAACACTTTAGAATTTAAATGGTTTCCCGATGGTGATATTGATGATGTTCAAACTGAGAGAGATATACTTGACAAGTTACAACCTCATCAAAACTTGAAAGAGTTAACAATTTATGGTTATCGGGGTGAAATATTCCCAGATTGGTTAGGCCTTTCTTGCTACTCCAATATGACCAAATTGACTCTGATGTTTTGTAAGAGTTGTTGTAAGTTTCCTTCATTGGCACATTTACCTTGTTTGCAACACCTGGAGGTTTCTAATCTTGTTGGATTGAAGAAAATTGATTTTGAGATTTACAACAAAAGCAAAAGCAAGGGATCATTTCAGCAGCTTCAAACACTGAAATTTGAGCATATGTCTAGTTGGAGGGAGTGGAATTTTCCTGATGAGTTTGATGGTTTTCCTCAGCTTAGAATCCTTGAAATAATAAGATGTCCGGTGTTTAGAGGAGATCTGCCTTCTCACCTTCCGGCTCTGGAGGAACTTACCATTGTTGGAAGTGAAGAGCTTTCGTGTATGTTGCCGAGGGCTCCCAAGCTTCACCAATTAAATGTACAGGGATATATGTATTCTATGGTGCAAGTGAATCCGCACGATGCAGTAATTTTAAATACCCAGCTGGCAAAGTCCGTATTGGAGTACTTGTACTACATCCAATCGCCATTTCTCCAATGTCTGTATATCAGTAAGTGTTGCTCGGCGATATCAATATCAACAGATTATTTGCCTGCTTCATTACAATATCTGCAAATCTCCAAATGTTCAAAATTAACATTCCCAGAGCAACTGCAACACAAGTCACTAACGGAGATATTTGTAAAGAAGTGCAATTCAGTGACGTTGTTTCCACTGGGGGATCTTCCAAATCTCAAGAAACTCACAATCATTAAATGTCAAAGCATGGAATGTGTTGTGGTGCCACATGCTCTTCCAAGTCTCCGTGATTTATGGATCTCAGAGTGTCCCAGCTTACTATCCTTGCCACCACTGGGGTCGGCTGCGCCCCGCCTCGAGGAGCTGTACATACACAATTGCCCAGAAATCAATTTTTCTGCTGAGGAGTCCCTCCCGCCAAGTTTGAAAAAACTTCAAGTTACTTTGTGCCAGAAACTAGCGAGTTGGATAACATCAAAGGGTTTGCAGAATCAAGGCCTTACCCATCTTATCCTTGAGGAATGGAATGAAGTTAAGTCGTTCCCAACAGAGGTTTGCCTTCCAGCTTCTCTTGAATCTCTAGAATTGTGCAAGTTTCCAAATCTGGAGACCCTTGACTGCAAGGGGCTTCACCATCTTACCTCCCTAAACAATTTAGCAATTAGAGACTCTGGAAGAGATGGAACACCCACGGATTCAATTCAGCTGACTCGGATGATGATTAATGTTACCGTTGATTCTGATTTTACACCATTTAAATTTTAA 3600 0.3922 MAAKLEGGAYLSSFVDAISEKLSSLLEHDFVLEVDDSAPELLQRLDDCLCDVGPVLDDAELKQFNDKRVKKWLDDLQDALYLTDDLVDELSTKAATATPTDPGNSYDWSHPVDSIIHDSGVTFIKKIVGKLESVVGRKGKLGLEKGAKVDFSSWRIPSTSLVISSDIYGRDNDKENIIKLLLDDTSCDVESPVTVIPIVGMGGIGKTTLAQLVYNDDRVEEKFGTRAWVCVAENPDPIHVTRTIIGAIDSSPCDVNHFDSLQTHLKEKLSGKTFLVVLDDVWHDQRDMWEDFLKPFRYGNGGSKILLTTRIEKVASVFAANNLHYRISLLSDEDCWSVFLKHSSISTNSKQYATLEPIGRKIVEKCKGLPLAVKTLGGLLRNKYNEGEWENVLESEIWELREDESNIVPALRVSYHYLPSHLKRCFVYCSLYPEDYEFDKDELVLLWMAEDLLQPKGNNTLENTGLAYFDELVARSFFQSSSTKRELFVMHDLMHDLATFFAGKFYVRLKDFDNQHKIDGKTRHLSYAAKYKDSDKLFQETYNGAIYIRTLLDFPLSQCDQSIDTECNPWLLQQQLGCLRVLTCSYYFRHSLSDSIGELIYLRYLNLSDSHIVRLSESICKLYNLQTLKLRNSYMLEMLPSSMQDLVNLRHLDIQNVFALKEMPNEMSKLMHLQFLSDYKVGEHERNGIRELGTMDNLHGSLCISKLEKVKNSGEALEAKMGNKKHINTLEFKWFPDGDIDDVQTERDILDKLQPHQNLKELTIYGYRGEIFPDWLGLSCYSNMTKLTLMFCKSCCKFPSLAHLPCLQHLEVSNLVGLKKIDFEIYNKSKSKGSFQQLQTLKFEHMSSWREWNFPDEFDGFPQLRILEIIRCPVFRGDLPSHLPALEELTIVGSEELSCMLPRAPKLHQLNVQGYMYSMVQVNPHDAVILNTQLAKSVLEYLYYIQSPFLQCLYISKCCSAISISTDYLPASLQYLQISKCSKLTFPEQLQHKSLTEIFVKKCNSVTLFPLGDLPNLKKLTIIKCQSMECVVVPHALPSLRDLWISECPSLLSLPPLGSAAPRLEELYIHNCPEINFSAEESLPPSLKKLQVTLCQKLASWITSKGLQNQGLTHLILEEWNEVKSFPTEVCLPASLESLELCKFPNLETLDCKGLHHLTSLNNLAIRDSGRDGTPTDSIQLTRMMINVTVDSDFTPFKF 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61074g00008 1199 SUPERFAMILY L domain-like 487 915 - -
Stsc61074g00008 1199 PRINTS Disease resistance protein signature 268 282 - -
Stsc61074g00008 1199 PRINTS Disease resistance protein signature 195 210 - -
Stsc61074g00008 1199 PRINTS Disease resistance protein signature 366 380 - -
Stsc61074g00008 1199 PRINTS Disease resistance protein signature 1012 1028 - -
Stsc61074g00008 1199 Gene3D Ribonuclease Inhibitor 945 1109 IPR032675 -
Stsc61074g00008 1199 Gene3D - 329 413 IPR042197 -
Stsc61074g00008 1199 Gene3D - 15 128 - -
Stsc61074g00008 1199 Pfam NB-ARC domain 171 399 IPR002182 GO:0043531
Stsc61074g00008 1199 PANTHER DISEASE RESISTANCE PROTEIN RP 58 872 IPR044974 GO:0006952
Stsc61074g00008 1199 Gene3D - 414 499 IPR036388 -
Stsc61074g00008 1199 FunFam Probable disease resistance protein At1g63360 415 500 - -
Stsc61074g00008 1199 Gene3D Ribonuclease Inhibitor 550 928 IPR032675 -
Stsc61074g00008 1199 SUPERFAMILY L domain-like 948 1167 - -
Stsc61074g00008 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 429 IPR027417 -
Stsc61074g00008 1199 Gene3D - 152 322 IPR027417 -
Stsc61074g00008 1199 Pfam Rx N-terminal domain 14 96 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61074g00008 Stsc-Chr61074 25852 29769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61074g00008 193 438 WRKY Transcription Factor Family AT5G45050 26.087 1.23e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61074g00008 - - ahf:112708719 1572.37