Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61073g00002 ATGGAGAAGGTTTGTGAATTCTGCACGGATTCGAGGCCACTTGTTTATTGTAAGGCTGATGCAGCTTATCTGTGTCTATCCTGTGATTCAAAGGTGCATTTTGCGAATGCACTATCCAGCCGGCATCTTCGCACCCTTGTTTGTAACTCTTGTAGATACCATCTTGCTTATGTACAGTGTTTGGATCACAAATTATTAATTTGTCAAGAGTGCGATCAAAAGCTGCACAATATCTCTTCACCACATAGAAAAAGAGCTATTAGAAGTTTCATGGGTTGCCCTTCTGCTAAAGACTTTGCGATGCTATGGTGTTTTGGATTGAATGAGATGGAAAACAGCACCTGTGAGGATTTTCTTGCATCTGTTTCATGTATTTCTGCTGATTCAAATATGGCACAAGCCTCGGGAAGGGCTGGAAGTCGAATATCATCTAAGGCCAAACTTCACAGGGGATCGAGCAGTCGACAAGGTCAGATATTACACAGTGATCAAGAGCGAAAGAAGATTCTGCAGCAGATTATCAACTTAAAACAGCTTCAGCTGAATGGTAATTCTAATCAAACCATAAAGATAAATGGGCCTGAAGAAGAAACAGACTTATCTTCTTCAGCATATCAAACTATCAAGAAATCAGATGGGAAATTCAATAAGCAAGAACAAAATTCAAAGGATGTTGAGGAAAAAGACAGTCACTCAGTGGAGCTGAATCCTGAACCTTTGCCTTCTACATTTTCTCAGCTTTATAGCTTGCCTTCTCCAATTGTAGATCTTCCCTTAAATGGAGAGTTGTTTTGGTCAGGCAAAAGTCCACCCCGAAGTAATCAGTTGTGGTCCCAAAACATACAAGACCTTGGGATATGCGAAGAACTTGTTTGTCGAGACGATTTCAACATACCTGATGTTGATCTAACATTCCAAAACTATGAGGAACTATTTGGAGGAGATCAAGATCCAGTTAGAGCACTGCTTGATGATAACGACGTTTCCTGCTATTCTTTAGAGAAGGATATGTCAATTGACAATCTAAGTGCAATAGAGGATTCTTCGGCAGCCATATCAATTACCATCTCACAAGCAGCTCATGAGAACAAGGATATGGATAGTACTAACGACCATCATTATCCAAGAATCACAGATCCTCCACACACAATTCGACCATTCGAGTCAACTCTGTCATCGTCTGTTTCAAGATTCTGTGCTGCAAGCAACCCTACTTATCACTATGACGGTTCCCTTTCTCCCTGCAGTGAAGAGAAAGCCTATTTAGGCAATTCAGATGAATTGGAGATATCACATGTGGAGGCCACACAAAATCTCACTCTCATGTATGAAGAGAAGCCAGCTCAACGGAATGAGAAGCAAGTTCGACTCCCATCTGGGAAACCTAGAGCTAATGTAAGAAAGAAGGTGAAAGGTACTGCCAAGGCAGAAAGCTATTGA 1440 0.4118 MEKVCEFCTDSRPLVYCKADAAYLCLSCDSKVHFANALSSRHLRTLVCNSCRYHLAYVQCLDHKLLICQECDQKLHNISSPHRKRAIRSFMGCPSAKDFAMLWCFGLNEMENSTCEDFLASVSCISADSNMAQASGRAGSRISSKAKLHRGSSSRQGQILHSDQERKKILQQIINLKQLQLNGNSNQTIKINGPEEETDLSSSAYQTIKKSDGKFNKQEQNSKDVEEKDSHSVELNPEPLPSTFSQLYSLPSPIVDLPLNGELFWSGKSPPRSNQLWSQNIQDLGICEELVCRDDFNIPDVDLTFQNYEELFGGDQDPVRALLDDNDVSCYSLEKDMSIDNLSAIEDSSAAISITISQAAHENKDMDSTNDHHYPRITDPPHTIRPFESTLSSSVSRFCAASNPTYHYDGSLSPCSEEKAYLGNSDELEISHVEATQNLTLMYEEKPAQRNEKQVRLPSGKPRANVRKKVKGTAKAESY 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61073g00002 479 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 473 - -
Stsc61073g00002 479 MobiDBLite consensus disorder prediction 135 162 - -
Stsc61073g00002 479 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Stsc61073g00002 479 MobiDBLite consensus disorder prediction 186 205 - -
Stsc61073g00002 479 MobiDBLite consensus disorder prediction 446 479 - -
Stsc61073g00002 479 MobiDBLite consensus disorder prediction 210 240 - -
Stsc61073g00002 479 MobiDBLite consensus disorder prediction 135 159 - -
Stsc61073g00002 479 SMART bboxneu5 48 87 IPR000315 GO:0008270
Stsc61073g00002 479 SMART bboxneu5 1 47 IPR000315 GO:0008270
Stsc61073g00002 479 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Stsc61073g00002 479 CDD Bbox1_BBX-like 4 47 - -
Stsc61073g00002 479 MobiDBLite consensus disorder prediction 212 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61073g00002 Stsc-Chr61073 5412 8820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61073g00002 1 319 C2C2-CO-like Transcription Factor Family AT1G68190 36.254 1.39e-59 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61073g00002 - - adu:107467199 796.578