Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61067g00003 ATGGATGAGCCCATCTTTGATGCCATTTGTGAGAGATTAAGGCGACGTGTATACATTAGAGGAAGTAATATATTGTGTCACGGTGACTTGGTCGAGAAGATGGTCTTTGTTGTGCATGGAAGACGAGAGAGCATCAATGAAGATGGAACTAGAGTTTGCTTATTCGATGAGGATGCTTGTGGTGAAGAACTATTGATATGGTGTCTAGAAAATTTGTTAGTTAGCACAGATGATAATAAATTGCGACCCCGTGAATGGAGGTTACATAGCAGTAGGACGGTAACATGCTTAACCGACGTCAGGGCCTTTTCACTTCGAGCTGTTGACCTTGAAGAAGTGATAACCCTTTTCGCAAGATTCTTGAAGAATCCAAGTACACTAGCAGCCATAAGGTATGAATTACCTTATTGGAGGTACCTTGGAGCAAGCCGAATTCAAGCTGCATGGAGATACAAGAAGAATCGATTAGGTGCTTCTTCACAAGCAAATTAG 492 0.4187 MDEPIFDAICERLRRRVYIRGSNILCHGDLVEKMVFVVHGRRESINEDGTRVCLFDEDACGEELLIWCLENLLVSTDDNKLRPREWRLHSSRTVTCLTDVRAFSLRAVDLEEVITLFARFLKNPSTLAAIRYELPYWRYLGASRIQAAWRYKKNRLGASSQAN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61067g00003 163 Gene3D Jelly Rolls 1 119 IPR014710 -
Stsc61067g00003 163 CDD CAP_ED 1 114 IPR000595 -
Stsc61067g00003 163 SUPERFAMILY cAMP-binding domain-like 1 120 IPR018490 -
Stsc61067g00003 163 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61067g00003 Stsc-Chr61067 11558 13178 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61067g00003 1 150 Ion Channels AT1G19780 39.103 1.24e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61067g00003 K05391 - qsu:112012074 204.912