Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61066g00005 ATGAGTTGCAACGGTTGCCGTGTTCTTCGAAAGGGTTGCAGTGAGACATGCATGTTGCGCCCTTGCTTGCAGTGGATCGAGACACCCGAGGCCCAAGGCCACGCCACCGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTCATGTCTTTCATTTCCAATGTACCGGAGACCCAGAGACCCGCTCTGTTTCAGTCACTGCTGTTTGAAGCGTGTGGAAGAACCGTGAATCCGGTTAATGGTGCCGTGGGGCTTTTGTGGACGGGGAACTGGCACGTGTGCCAGGCGGCAGTGGAGACGGTGCTCCGCGGCGGCACCTTGAGGCCCGTGCCGGAGCTTATGGGACTGGAATCGGCCGGTCCGATGATAGCCACCGACGAGGCATCGGAGGTTGAGGTCACGTGCGGTGACATATGGAAGAAGGTTCGAGATCCGAACCCGAGTTGCCGGTTCACAAGCTCACGGTCTACACGTGTTGCTGCCGGCGGAGGAAAGCGGAAGCGGCAGGAGGAGGTGGCGACGGTCCAGACGGCGGCTGATCTTGATCTCCGTCTGACGCCGATCTTCCTTCAGAAGATCGCCGATTACCGGCGCCGGCCTGGATCGCCGTCGATGACGTCGGAGGAGTCCGTGACAACGACTGCGGAGATCGGAGGTGATCAGTGGGGTTACGGCGGTGACCGGAAAGTTCTCAACCTTTTCATTTGA 708 0.6003 MSCNGCRVLRKGCSETCMLRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISNVPETQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELMGLESAGPMIATDEASEVEVTCGDIWKKVRDPNPSCRFTSSRSTRVAAGGGKRKRQEEVATVQTAADLDLRLTPIFLQKIADYRRRPGSPSMTSEESVTTTAEIGGDQWGYGGDRKVLNLFI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61066g00005 235 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Stsc61066g00005 235 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Stsc61066g00005 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61066g00005 Stsc-Chr61066 19448 21252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61066g00005 1 235 AS2 family AT4G37540 58.730 2.21e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc61066g00005 LOB 5.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61066g00005 - - adu:107481389 444.121