Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61061g00002 ATGCGGTGGAGCCCTCACTCTCTGTTCCTCTTATGCTTCCATTTCTTATTCCTTCGCTCCGCCATCACCACCACCATCAACCTCTCTTCCCCTTTCTCTCCCTCACAAAACCTCACACTCTACGGCGACGCCTTCTTCACCGACCACTCCATCACTCTCACCACCGACCAATTCTCCTGCTCCCAACCTCCTCCTCCTCCTCCTTCTTCCACTTCAGGTGTTGGAAGAGCTTTCTACGTTTACCCCGTTCGCTTTCTTGATCCCCAAACTAACTCCACGGTTTCGTTCACGTCCCGATTCTCGTTCTCCATCTCCTCCTCCTCTTCTTGCCCCTCCCCCGACGGCATCGCCTTCCTCATCTCCTCCAACACCGACTTCGGAACCCTCTCTCGCGGTTACTTGGGCCTCCCTGCAGCCATTCTCGACCAGCCACAGCACCAAGACTCTTTCTTCGCCGTCGAATTCGACACGAGCTTCGACCCTGCTCTCGGCGACATCAACGCCAATCACGTCGGAGTTGATCTCAACACCGTCGTTTCTTTTGCCTCTGTTGACACTCTGTCTCGCGGCGTTGACCTCAAGAGCGGGAAAGTCATCAATGCGTGGATTGAGTATAGGGATTCCATGAAGATGGTTCGTGTTTGGGTTTCTTATTCTTCAACTCGGCCTCCATCTCCGATTCTTGCTTCCCAGGTGGATCTTTCTGAGCAAGTCAAGGAGTTCATGCATGTTGGATTCTCTGCTTCCAATGGTGGAGGTTCGGCTCTTCATGTTATTGATCATTGGCAATTCAAGACTTTTGATTATGGCTCTCGTGAAGATGTTACTCCTATGGATACGGTTGAAGAAGGGAACTGTGTCTTTTGTTATCCCGGGGAGCATGATTTGGATTCTGCTTCGTCTGTTCGGCGAAACGGCACGCGTCGGAGGAGGCAGCAGAAGATTAGTGAGATGGCTCTTGGATTGGGAGGGATAACTGCTTTTCTAGTTTCTGTAGTGGCTGCAGGTTTTGTTATCTCAATTTTCTTGTCAAAGAAGAAAAATAATGGTACTGGAAAGAAAAATTGTAGGTTTCAGACAACTAAAGTGCCTATGAGATTGTCACTTTCTGAGATCAAATCTGCTACAATGGGGTTTAATCGCGATAGGCTCGTTGGGGAAGGTGCTTCGGCAAAGGTTTACAAAGGGTCACTTCAATGTGGACTAGATGTTGCAGTGAAGAGGTTTGGCAATGTTGATGGTTTGGATTGTTTGCACAATCCTTTCGCCACCGAGTTCGCCACCATGGTGAGTTACTTGAGGCACAAGAATTTGGTTCAGCTTAAGGGATGGTGCTGTGAGGGGAATGAGTTGCTTTTGGTTTATGAGTACTTACCAAATGGCAGCCTCAACAAGGTTCTGCATAGGAACTTCAATTCTTCAATTGTCTTAACATGGAAGCAAAGGGTTAATATAGTTCTCGGTGTTGCTTCTGCTCTTACCTATCTCCATGAAGAATGTGAGAGGCAAATCATTCATAGAGATGTGAAGACTTGCAACATAATGCTTGATACAGAGTTCAATGCAAAGCTTGGGGATTTTGGACTTGCTGAAGTGTATGAGCATAGTTCTAGCACAAGGGATGCTACCATACCAGCAGGAACAATGGGTTACCTTGCACCGGAATATGTGTACTCCGGCGTTCCAACAGTGAAGACTGATGTTTACAGCTTTGGTGTGGTGGTGTTGGAGGTGGCTACAGGGAGGAAGCCAGTGGAGGATGATGGAACCGTGGTTGCGGATTTTGTGTGGGGATTGTGGGAGAAGAACAAGCTCATTGATGCTGCTGATCCAAGATTGAAGGGTAACTTTGATGTACAAGAGATGGAGAGGATGCTGTTGGTGGGGCTTGTTTGTGTTCATCCTGATTATGAGAGGAGGCCAAGGGTGAGAGATGCAGCTAGAATCCTCAAGAAAGAAGCACCACTTCCATCATTGCCATTGGCTAAGCCTAGAGTGAGAATTAGGCCTGTTTGTCCAAATGATACACCAGAGACACAGAATGCTGTTGTTGGGGATTGGTTTAGTTCTGATGATGCTCCTTATTTGACTCCTGGGAGCCAGTTTTACTAG 2112 0.4777 MRWSPHSLFLLCFHFLFLRSAITTTINLSSPFSPSQNLTLYGDAFFTDHSITLTTDQFSCSQPPPPPPSSTSGVGRAFYVYPVRFLDPQTNSTVSFTSRFSFSISSSSSCPSPDGIAFLISSNTDFGTLSRGYLGLPAAILDQPQHQDSFFAVEFDTSFDPALGDINANHVGVDLNTVVSFASVDTLSRGVDLKSGKVINAWIEYRDSMKMVRVWVSYSSTRPPSPILASQVDLSEQVKEFMHVGFSASNGGGSALHVIDHWQFKTFDYGSREDVTPMDTVEEGNCVFCYPGEHDLDSASSVRRNGTRRRRQQKISEMALGLGGITAFLVSVVAAGFVISIFLSKKKNNGTGKKNCRFQTTKVPMRLSLSEIKSATMGFNRDRLVGEGASAKVYKGSLQCGLDVAVKRFGNVDGLDCLHNPFATEFATMVSYLRHKNLVQLKGWCCEGNELLLVYEYLPNGSLNKVLHRNFNSSIVLTWKQRVNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDTEFNAKLGDFGLAEVYEHSSSTRDATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVEDDGTVVADFVWGLWEKNKLIDAADPRLKGNFDVQEMERMLLVGLVCVHPDYERRPRVRDAARILKKEAPLPSLPLAKPRVRIRPVCPNDTPETQNAVVGDWFSSDDAPYLTPGSQFY 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61061g00002 703 Gene3D Phosphorylase Kinase; domain 1 339 457 - -
Stsc61061g00002 703 CDD STKc_IRAK 385 652 - -
Stsc61061g00002 703 SUPERFAMILY Protein kinase-like (PK-like) 357 650 IPR011009 -
Stsc61061g00002 703 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Stsc61061g00002 703 Pfam Protein kinase domain 380 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61061g00002 703 CDD lectin_legume_LecRK_Arcelin_ConA 32 267 IPR001220 GO:0030246
Stsc61061g00002 703 ProSiteProfiles Protein kinase domain profile. 379 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61061g00002 703 FunFam L-type lectin-domain containing receptor kinase VIII.1 458 668 - -
Stsc61061g00002 703 PANTHER - 56 657 - -
Stsc61061g00002 703 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 266 IPR013320 -
Stsc61061g00002 703 Pfam Legume lectin domain 32 267 IPR001220 GO:0030246
Stsc61061g00002 703 SMART serkin_6 379 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61061g00002 703 FunFam L-type lectin-domain containing receptor kinase S.6 345 457 - -
Stsc61061g00002 703 Gene3D Transferase(Phosphotransferase) domain 1 458 655 - -
Stsc61061g00002 703 Gene3D - 27 279 - -
Stsc61061g00002 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61061g00002 Stsc-Chr61061 18659 20770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61061g00002 6 702 Receptor kinase-like Gene Family AT5G42120 55.478 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Stsc61061g00002 Pkinase 5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61061g00002 - - gmx:100783805 948.347