Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61056g00003 ATGGCTAAAGAGATTAAAACTGGCGAAATTGTGGCTCTGAAGAAAATTCGAATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCTATACAAGAAATCAAAATTCTTAAGAAACTACACCATGAAAATGTGATCAAGGTCAAGGAAATTGTCACTTCTCCAGGTACTGCTTTTAAATAA 180 0.35 MAKEIKTGEIVALKKIRMDNEREGFPITAIQEIKILKKLHHENVIKVKEIVTSPGTAFK 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61056g00003 59 ProSiteProfiles Protein kinase domain profile. 1 59 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc61056g00003 59 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
Stsc61056g00003 59 PANTHER CELL DIVISION PROTEIN KINASE 2 53 - -
Stsc61056g00003 59 SUPERFAMILY Protein kinase-like (PK-like) 2 53 IPR011009 -
Stsc61056g00003 59 Pfam Protein kinase domain 2 54 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61056g00003 Stsc-Chr61056 13441 13790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61056g00003 1 55 Core Cell Cycle Gene Families AT5G10270 94.545 2.74e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Stsc61056g00003 Pkinase 6.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61056g00003 K08819 - thj:104801719 106.686