Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61049g00003 ATGATTGCTACCTCAAACAACATAGTTTCAAGATGTGCTCTTGGACGAAAGTATGATATCCCAGATGGTAGTCACCATGAAAGCTTTGGAGAGCTTGGAAGGAAGTTGCTAGGGCAACTCATTGAATTTTGTGTTGATTCTTTCTTGAATGGGGTAATTGAAGAGCACAACAAGAAGAAGAACAATGATGATGATAATAGTAACAAAGACTTTGTGGATATACTTCTTCATCTTCAAGAGAAGGGTATGCTGGAATTTGAGCTCACTCAAGCCGATCTCAAAGCATTACTAAAGGATATGATTGTTGGAGGGACTGATACTACGTCGACAACATTAGAATGGACTTTTGCTGAACTCCTTAAGAAGCCAAATATCATGAAGAAAGTTCAAGAAGAGATAAGGAGAATTGTGGGGAACAAATCAAAGGTGGATGAAAGTGATATAAATCAAATGAATTATTTGAAGTGTGTACTCAAAGAATCTCTTAGGTTACATCCACCTCTTCCTATCTTACTTGCTAGACAAACAACATCAAATTCAAAAATAAAAGGGTATGATATTCCTTCAAAAACAACTGTTTATTTGAATGCTTGGGCAATTCATAGAGATCTTGAATTGTCGGAGAATTCATTGTCGGAGAATCCTGAAGAATTCATCCCTGAAAGATTTGAAAGTATTCTAATTGATTACAAAGGACAAGATTTCCAGTTATTGTCATTTGGTACTGGGAGAAGAAGTTGTATTGGAATTTCATTTGAACTTGCTTCTATTGAAATTATTCTTGCTAATCTTTTATATTGGTTTGATTGGAAGCTACCTTTTGAAAATGGTGAAGTAGTGCAAGACATTAATATGAGTGAAATGTCTGGAATCACTGTTAGCAAAAAAAGTTCCACTTCTTCTTCAAGCCATATCATATTTTCATTGATTTAA 933 0.3473 MIATSNNIVSRCALGRKYDIPDGSHHESFGELGRKLLGQLIEFCVDSFLNGVIEEHNKKKNNDDDNSNKDFVDILLHLQEKGMLEFELTQADLKALLKDMIVGGTDTTSTTLEWTFAELLKKPNIMKKVQEEIRRIVGNKSKVDESDINQMNYLKCVLKESLRLHPPLPILLARQTTSNSKIKGYDIPSKTTVYLNAWAIHRDLELSENSLSENPEEFIPERFESILIDYKGQDFQLLSFGTGRRSCIGISFELASIEIILANLLYWFDWKLPFENGEVVQDINMSEMSGITVSKKSSTSSSSHIIFSLI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61049g00003 310 Gene3D Cytochrome P450 1 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 FunFam Predicted protein 101 300 - -
Stsc61049g00003 310 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 240 249 IPR017972 GO:0005506|GO:0016705
Stsc61049g00003 310 Pfam Cytochrome P450 45 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PRINTS P450 superfamily signature 103 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PRINTS P450 superfamily signature 238 247 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PRINTS P450 superfamily signature 156 167 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PRINTS P450 superfamily signature 247 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 SUPERFAMILY Cytochrome P450 4 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PRINTS E-class P450 group I signature 237 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PRINTS E-class P450 group I signature 155 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PRINTS E-class P450 group I signature 247 270 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PRINTS E-class P450 group I signature 196 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PRINTS E-class P450 group I signature 4 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00003 310 PANTHER CYTOCHROME P450 71B11-RELATED 45 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61049g00003 Stsc-Chr61049 15084 16866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61049g00003 5 295 Cytochrome P450 AT3G48310 37.736 1.02e-72 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61049g00003 K20617 - tcc:18604981 320.087