Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61049g00002 ATGGCACTTGTTCTAAAGCAATTCCCGTATACCCTTTACCTTTCAATATTAGTTGGCATCATTAGCATCCTTCTTCTCGTACTTAATCATCTCATCGTCACAAGAAGAAGAAAATCCATTAGTCTTCCTCCATCCCCACCAAAGCTACCCTTCATTGGAAACCTTCATCAACTAGGAACACTTCCACACCGTTCCTTGCATGAGCTCTCAAAGAAGCATGGCCCATTCATATCCCTTCAATTAGGGCAAATCCCAACATTAGTGATTTCTTCGGCCGACACGGCCAAAGAAATCATCAAATATCACGATGTTATTTTCGCGAACCGACCACATAACACCGCTGCGAAAATCTTTGGATATGGATATAAAGACATAGCTTTTTTGCCTTACGGTAAAGAGTGGAGACAGAAAAGGAAGATTTGTATTCTTGAACTTTTAAGCCTCAAAAGAGTGAAATCATTTCACACCATAATGGAAGAAGAGGTTGCCGAATTGGTACATAACATACATGAATCTTGTTTAACAAGTAAAGATTCATCATCTTCATGTATGATTAATCTTAGTGAGATGATAATTGCAACATCCAATGACATAGTATCAAGATGTGTTCTTGGACAAAAGTGCCATGCCCTAGAATATGGTAGTAGTAACTTTGGTGAGCTTGCAAGAACAATCATGAAACAACTCAATGCTTTTTGTGTTGGTGATTTCTTCCCCTCTTTGCATTGGATTGATGTTCTCACAGGTTTTATGTCAAAAGTAAATCACAGTTTTGTGGCATTAGATGCTTGCTTAGAAGTGGTGATTGAAGAGCACAAGGGAAGGAAGAAGAATCATGATGATCATTCTGAAAATAATAACAAAGACTTTGTTGATATACTTCTTCAGATCCAACATAATAATATGCTTGAGATTGAGCTCACACAAGATGACATCAAAGCAATCCTAGCAGATATGTTTATTGGAGGAAGTGATACCACTTCAACAGTTGTAGAATGGACATTTGCTGAGCTCCTTAAGAACCCAAATACCATGAAGAAAGCCCAAGAAGAGGTAAGAAGAGTTGTGGGGAGCAAATCAAAAGTAGATGAAAATGATGTGAATCAAATGAACTATTTGCATTGTGTGATCAAAGAAACTCTAAGATTGCATCCACCTGCCCCTCTTTTACTTCCTAGAGAAACAACATCAAATGTAAAGGTAAAAGGATATGATATTCCTCCAAAAACAAGATTGTTTATAAATGTATGGAGTATCCAAAGAGACCCTGAACTATGGATTGATCCAGAAAATTTTACTCCTGAGAGATTTGAGAACACCAAAGTTGATATCAAGGGACAAGATTTTCAATTGATGCCATTTGGTTCCGGAAGAAGGGGGTGTCCTGGAATTTCATTTGGATTTGCTTCTGCTAAATTCATTCTTGCTAATCTTTTATATTGGTTTGATTGGAAGCTTCCTCCTAATTATGCCGGCGATGGTATGGACATGAGTGAAATATATGGTGTCACTGTCAACAAGAAAGTACCACTTCATCTTACACCCATACCTATCTACTCTTCTAGATTTTAG 1572 0.376 MALVLKQFPYTLYLSILVGIISILLLVLNHLIVTRRRKSISLPPSPPKLPFIGNLHQLGTLPHRSLHELSKKHGPFISLQLGQIPTLVISSADTAKEIIKYHDVIFANRPHNTAAKIFGYGYKDIAFLPYGKEWRQKRKICILELLSLKRVKSFHTIMEEEVAELVHNIHESCLTSKDSSSSCMINLSEMIIATSNDIVSRCVLGQKCHALEYGSSNFGELARTIMKQLNAFCVGDFFPSLHWIDVLTGFMSKVNHSFVALDACLEVVIEEHKGRKKNHDDHSENNNKDFVDILLQIQHNNMLEIELTQDDIKAILADMFIGGSDTTSTVVEWTFAELLKNPNTMKKAQEEVRRVVGSKSKVDENDVNQMNYLHCVIKETLRLHPPAPLLLPRETTSNVKVKGYDIPPKTRLFINVWSIQRDPELWIDPENFTPERFENTKVDIKGQDFQLMPFGSGRRGCPGISFGFASAKFILANLLYWFDWKLPPNYAGDGMDMSEIYGVTVNKKVPLHLTPIPIYSSRF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61049g00002 523 FunFam Cytochrome P450 83B1 30 514 - -
Stsc61049g00002 523 SUPERFAMILY Cytochrome P450 43 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Stsc61049g00002 523 Pfam Cytochrome P450 43 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 CDD CYP71-like 72 511 - -
Stsc61049g00002 523 Gene3D Cytochrome P450 29 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61049g00002 523 PANTHER CYTOCHROME P450 71B11-RELATED 27 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61049g00002 Stsc-Chr61049 7117 9483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61049g00002 12 515 Cytochrome P450 AT3G26300 43.195 6.96e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61049g00002 K20617 - cave:132175480 603.208