Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61044g00003 ATGAGCTCATCAACCAGCACCATTACAACAAGGTCTGGAAACAGCACCACCCAGGCTTGTGCTGTCTGCAAATACCAACGCCGCAAATGCGCTCCTGATTGCATTCTTGCTCCCTATTTCCCCCATGATCGCCAACGCCAATTCCTTAACGCCCACAAGCTCTTCGGCGTCAGCAACATCACCAAGATAATCAAGTTTCTTGATCCTCACGACAAGGATCAAGCCATGAAAACAATCATCTTTCAATCTGATATGCGTGCCAATGATCCTGTTGGTGGTTGCTATAGGTACATACAAGAGCTTCAGGCTCAGATCGAGTTTTACCGGGCTGAGTTGGACCTCGTGCTTCAACAACTAGCCATGTTTAGAGCCCAGGCCCAGCACCAACAGGCCCAACACCTTTACAACCAAACCGCCACCAGTAACGTAAATGTCAGCACCCTCAACGGAGATGAAGCTATGAATGCAGATCTGTACAATTCTAATGGCGGCGTTGTTGTTGGTGGTAATGGGGTTAATCATTATCATTACCTCCAACAAGTGCCGCATGATCAGTATATGATGATGCAAGAGGTGAATGATAGTAGTAGCAATAACGGAACCCCTTTGCAAGAACATGTTAACATGTGGTCCATGCAAAATTCGCTATCGTCCTTGTCTTTGCAGGGACAGAATAGTAATGGTAGCATTGGTGATGACTATGATCATAAGCCAATGCTTGACATGAGTTCTGATGAGAGAAATGAGCTTGGATTTGAGCCTGAAGATTTAGTCCATCGCAG 782 0.4604 MSSSTSTITTRSGNSTTQACAVCKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKFLDPHDKDQAMKTIIFQSDMRANDPVGGCYRYIQELQAQIEFYRAELDLVLQQLAMFRAQAQHQQAQHLYNQTATSNVNVSTLNGDEAMNADLYNSNGGVVVGGNGVNHYHYLQQVPHDQYMMMQEVNDSSSNNGTPLQEHVNMWSMQNSLSSLSLQGQNSNGSIGDDYDHKPMLDMSSDERNELGFEPEDLVHR 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61044g00003 260 MobiDBLite consensus disorder prediction 234 260 - -
Stsc61044g00003 260 Coils Coil 98 118 - -
Stsc61044g00003 260 MobiDBLite consensus disorder prediction 218 260 - -
Stsc61044g00003 260 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 152 - -
Stsc61044g00003 260 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
Stsc61044g00003 260 Pfam Lateral organ boundaries (LOB) domain 19 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61044g00003 Stsc-Chr61044 30081 30862 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61044g00003 18 256 AS2 family AT3G13850 51.452 3.25e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc61044g00003 LOB 4.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61044g00003 - - vum:124830493 300.056