Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61039g00003 ATGCCACTCTCAAAACTCATTGCTTCACTACCAATCCACCCGTCAAAAACCTCCTCCATCCAACGCTTGATGAGAATCTTAATCCATTCCGGATTCTTCGCCACGAAGAATGTTGCCAACGATGACTGTGAAGTTGAGTATGTGTTAACTGATTCATCCATGCTTCTACTTAAGAACAATCCCTTAAGTATGAAGCCATACTTACTTGCCATGCTTGATCCAATATTAACAAATCCATGGCATAAATTGTCAACATGGTTCCAAAGTAACAATCCCACATCATTTGAAATAGAACATGGGATGATGTTTTGGGATTATGCTTGTCATGTGCCTAAACTTAATGAATTTTTCAATGACGCCATGGCAAGTGATGCTCGATTGGTTAGCAAGTTGTTAGTTGATGACAAGTGCAAGGGTGTGTTTGAGGATTTGGAATCGTTGGTTGATGTTGGTGGAGGCACTGGAACTCTTGCAAAAGCCATTGCAAAATCATTCCCACACTTAGATTGCATTGTATTTGATCTCCCACATGTTGTTGCTGACTTGGAAGGAAGTGAGAACCTTAAATATATTGCAGGGGACATGTTTGAGGTCATTCCTCCATCCAATGCCATTTTGTTGAAGTGGATTTTGCATGATTGGAATGACGAAGAATGTGTGAAGATATTGAAAAATTGCAAGGAAGCAATCATGAGCAAAGACAAAGGAGGGAAGGTTATTATCATAGACATGGTAGTAATGGAAGAAGATGAGAAAAAAGGTGATGATAAATCTGTTGAAACACAACTCTTCTTTGACATGCTGATGATGGTGTTGCTCACAGGAAAAGAGAGAAATGAAAAAGAGTGGGCCAAATTAATCTTGTCTGCTGGATTTAGTTACTACAAGATAACTCCGGTTCTTGGACTGAGGTCCCTCATTGAGATATATCCGTAG 936 0.3964 MPLSKLIASLPIHPSKTSSIQRLMRILIHSGFFATKNVANDDCEVEYVLTDSSMLLLKNNPLSMKPYLLAMLDPILTNPWHKLSTWFQSNNPTSFEIEHGMMFWDYACHVPKLNEFFNDAMASDARLVSKLLVDDKCKGVFEDLESLVDVGGGTGTLAKAIAKSFPHLDCIVFDLPHVVADLEGSENLKYIAGDMFEVIPPSNAILLKWILHDWNDEECVKILKNCKEAIMSKDKGGKVIIIDMVVMEEDEKKGDDKSVETQLFFDMLMMVLLTGKERNEKEWAKLILSAGFSYYKITPVLGLRSLIEIYP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61039g00003 311 CDD AdoMet_MTases 147 246 - -
Stsc61039g00003 311 FunFam O-methyltransferase ZRP4 58 311 - -
Stsc61039g00003 311 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 311 IPR016461 GO:0008168
Stsc61039g00003 311 Gene3D Vaccinia Virus protein VP39 57 311 IPR029063 -
Stsc61039g00003 311 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 309 IPR029063 -
Stsc61039g00003 311 PANTHER O-METHYLTRANSFERASE 3 295 IPR016461 GO:0008168
Stsc61039g00003 311 Gene3D - 1 56 IPR036388 -
Stsc61039g00003 311 PIRSF O-mtase 1 311 IPR016461 GO:0008168
Stsc61039g00003 311 Pfam O-methyltransferase domain 80 293 IPR001077 GO:0008171
Stsc61039g00003 311 SUPERFAMILY "Winged helix" DNA-binding domain 1 61 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61039g00003 Stsc-Chr61039 12819 15300 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61039g00003 9 311 Monolignol Biosynthesis Gene Families AT1G51990 33.657 1.23e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61039g00003 - K16040 aip:107609507 467.618