Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61025g00001 ATGCTTGGTCCTGAAGCAGAACTCAAGATAAGTTTTGGTTACCAATGCAATGGTGTCGCAGATATCTCGTGCAAGTATATCAATGGCTACAAACTCCTTCCTTATTTCCCCAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCAGCCTTAAGTGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGGGAAGAAATCCTTCCTAGTTTGGACTCTCCTAAATCGTTTCGAAAGGTGTCCTCGTCACCGAGTCTTTCGAAGCTGGACATACTATCATCTTCTCTCCATAGTAGTTTGTCAAACCTCAGTTCCAGTCCATCCGCACAGAGTGATATGGTTGATTACGACTCTTGTACAACTAGTGCTCCTTGCAAAAGCGAAGGATTTCTCAATGCTACCGAAGTACAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGGGTTCAAGCTGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGGAATTTATGATGGCTTTAATGGCAGGGACGCAGCTGACTTTCTGGCCTGTACCCTTTACGACACTATCATATCTCATTTTAATATGCTGTATTTGGATTTGGAATCAGATTCCATCAAAGCTTCCAACAGTCTTGATTTGGGTGAATCATTTCAATACGAGTTGGATGAGCATCAATCTCCTTCTCGAAAATCATTCTCACATGGTGTTCTTGATAGCCTCCAGCGTGCTCTCAGTCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAAGAAATGGAGGACCGTCCGGATTTAGTTTCTGTTGGATCTTGTGTTTTACTTGCACTGCTTCATGGCGAACATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTAGCATCATGCGGTGAGGATGACAGAATAAATGGCAAAGAGAGAAGAATGAAAGCTATCCAGCTTACGGATATTCATACCGTTGACAATGGAGCTGAAAGAGCTAAACTTCTTTCTGGTCACCCCGAGGATCCTAAGGCCATTGTAGCTGGGAAAGTGAAAGGAAAACTGAAGGTTACTCGAGCTTTCGGAGTTGGCTACTTGAAAAAGAAAATTTTGAATGATGCATTGATGGGAATCCTTCGAGTGCGTGATCTCATAAGCCCGCCATACATTTCGACTCAACCTTCACTAAACGTGCATAAAATCTCGAGTTCCGATCAATTTGTTATAGTTGCGAGTGATGGTCTGTTTGATTTCTTCAGCAATGATGAAGCAGTAGAGCTTGCAGAGTCTTACATCCTAAGCAATCCATTTGGTGATCCAGCAAAATTCCTTGTTGAGCAACTTATAGCAAGAGCTGCTGATTCTGCAGGTTTGAGCACAGAAGAGTTGGTGAATATTCCAGCCGGGAGGAGGAGGAAGTATCACGATGACGTGACCGTGATTGTGATCATTCTTGGGATGAATCAACGGACTTCAAAGGCGTCAACTTTAGGGGTACCAAAAAAATTTTTCATTTGA 1497 0.4295 MLGPEAELKISFGYQCNGVADISCKYINGYKLLPYFPRTSSFSCLSGAALSANATLANTNICNGVIGEEILPSLDSPKSFRKVSSSPSLSKLDILSSSLHSSLSNLSSSPSAQSDMVDYDSCTTSAPCKSEGFLNATEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLACTLYDTIISHFNMLYLDLESDSIKASNSLDLGESFQYELDEHQSPSRKSFSHGVLDSLQRALSQVENDFLYMVEQEMEDRPDLVSVGSCVLLALLHGEHLYTLNLGDSRAVLASCGEDDRINGKERRMKAIQLTDIHTVDNGAERAKLLSGHPEDPKAIVAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLISPPYISTQPSLNVHKISSSDQFVIVASDGLFDFFSNDEAVELAESYILSNPFGDPAKFLVEQLIARAADSAGLSTEELVNIPAGRRRKYHDDVTVIVIILGMNQRTSKASTLGVPKKFFI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61025g00001 498 SUPERFAMILY PP2C-like 147 479 IPR036457 -
Stsc61025g00001 498 Gene3D - 106 487 IPR036457 -
Stsc61025g00001 498 Pfam Protein phosphatase 2C 226 432 IPR001932 -
Stsc61025g00001 498 CDD PP2Cc 146 478 IPR001932 -
Stsc61025g00001 498 PANTHER PROTEIN PHOSPHATASE 2C 117 476 IPR015655 GO:0004722|GO:0006470
Stsc61025g00001 498 SMART PP2C_4 124 476 IPR001932 -
Stsc61025g00001 498 ProSiteProfiles PPM-type phosphatase domain profile. 133 478 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61025g00001 Stsc-Chr61025 10660 14352 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61025g00001 4 490 PP2C-type Phosphatase Gene Family AT3G16560 63.052 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61025g00001 - - gmx:102666789 691.804