Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61022g00003 ATGGAAGAAGGGGATGAGTGTTTTTGCGCGTTGTGCGGGAAGAGGGCTCAGATGCTGTGCGAGTCGGACCAGGCTAAGCTATGCTGGGACTGCGATCGCACCGTTCACGGAGCCAACTTCCTTGTCGCTAAGCACCTCAGAGTGCTCCTCTGCCGTCACTGCCACCGCCCCACTCCCTGGAAGGCTTCTGGTCCCTCCCTCACCGTTACCTCCTCTCTCTGCCATCCTTGCTCTTCTTCTTCTTCTCTTTCCATCACCACCGCCATTCATCATGATTCTGAAGATGAATCTGATGATGACGAAGACGAAGACGAAGACGAAGATGAAGAGGAAGAGGAAGAGGAGGAGGGAGAGAACCAGGTGGTGCCTTTGTCTTCCGTTTCCGGTGATAATAACGGCGACGATGATGGAGGAGACATGTCTAGCAACACTACTTCGTCTTCTTTTCGATTCAACAACTTGAAGCGCTCTCAACATAATCATAACAACATCCACCATTCTTCTATTTCTGATGAAGATGATGAGATTGGGTGTTGCTCGTCGGAAAGATTAGGAGGTGATAATGATGATGAACACTATTCCATCTCTATGAGGCCATTCAAGCACCCAAGAATCTTCAATCACAGGGATGATCCACATTGCCACAATCATAGACGGTGA 660 0.4939 MEEGDECFCALCGKRAQMLCESDQAKLCWDCDRTVHGANFLVAKHLRVLLCRHCHRPTPWKASGPSLTVTSSLCHPCSSSSSLSITTAIHHDSEDESDDDEDEDEDEDEEEEEEEEGENQVVPLSSVSGDNNGDDDGGDMSSNTTSSSFRFNNLKRSQHNHNNIHHSSISDEDDEIGCCSSERLGGDNDDEHYSISMRPFKHPRIFNHRDDPHCHNHRR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61022g00003 219 MobiDBLite consensus disorder prediction 121 148 - -
Stsc61022g00003 219 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 8 172 - -
Stsc61022g00003 219 Pfam B-box zinc finger 8 45 IPR000315 GO:0008270
Stsc61022g00003 219 MobiDBLite consensus disorder prediction 90 148 - -
Stsc61022g00003 219 SMART bboxneu5 4 50 IPR000315 GO:0008270
Stsc61022g00003 219 MobiDBLite consensus disorder prediction 94 119 - -
Stsc61022g00003 219 CDD Bbox1_BBX-like 9 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61022g00003 Stsc-Chr61022 21939 23469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61022g00003 9 77 C2C2-CO-like Transcription Factor Family AT5G54470 65.217 1.21e-25 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Stsc61022g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61022g00003 - - aip:107614151 281.567