Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61021g00003 ATGTCCCACACTACATTCACCTTCCTCTTGTGCTTCTTATCACTCCTCTTGTCTTCTTCCTTCTCCCGCCACCTCCTTCACCATCCACTCTTCCCGGCTCCTTCACTCCCCATTCCCCCAACACAACCGCCATCTCACTCTCCTCAACCACAACCACAGCCGCAACACCACCAACCCAAGCTTCCATTCTCTTCCATTTCATCACCTTCATCACCATCTTCTTCTTCCCAACCAAACAACCCTTTCTTCTTCCCCACCTACCCTCCATCTCCACCTCCTCCATCACCCTCCGTCGTCGCCACATTCCCGGCCAACATCTCCTCCCTCCTCCTCCCCCACCCCACTGCCAGACACCACCGTCCCGCCCTCGCACTTGCTCTCTCCCTCTCCCTTCTCTCCCTCGCTCTCCTCTCCGCCGCTGCCGCCTTCGCTCTCCACCGCCGCAACCGCACGTCCTCCTCCTTCCACGCCGACGATCACGAAGATGACGACAAGGCCTCCAGACAAGACAGCCTCCGTCTGTTCCCTCGCAACGCTGCCACCTCCGACGGCACCCACCCCAAGCCCCGCGGCGGCACCGGTGCCACCTCAAGCCCACGCACAGATTACCTCTACCTCGGGACGGTGGCGACTTCAGAGCCCCCGGATTCAAGCTCCAGCAACACCACCGGAACCTTAATAGCTCCTCCGTACCGGAAACTGGGTGACTCTCCGGAGCTGAAACCACTGCCTCCCCTTCCCCGCCATAATCTCCGGCCATGGCTGAGTGAAGAAGAAGAAGAAGACAAGAAAGAAAAGCATAAGGAGTATCAAGATGAAGAAGAAGATGAAGAGTTCTTTTCTCCGAGAGGCTCTTCCGGTAACAAACAACAGAGTCCTCCTTCCCCTGTTGCGGTTCTTGGAATCGGAGATTCGAGTCCCCGTTCATTGGAGGCTTTTCATTTGGAGAAACTCCGATGCACAAGCTTCACTTCAAGAACTCCATCTCATTCTTGTTCTCCTCATCAGAACCCAGTTTCTGCGTCGCACTCTCCGTCTTCTTTCTGTTCTTCACCTTCTTCTCCTAAGCCTATAGAGGAGTTTAGATCCAGTTGGGATGTTCCGGCCACCAAACTTCCTTCTCCTCCACCACCACCACCACCACCACCGCCTCCGCCGCCGCGTTTCTGGGAGACTCCGGTGATGAATACGTTGGCGCCGAATGAGAGTGAGGAAACTCCGAAGCCAAAGTTGAAAGCTTTGCATTGGGATAAAGTGAAAGCTAGTTCTGATAGGGCAACGGTTTGGGATCGCTTGAGACCAAGTTCTTTCCAATTGAACGAGGACATGATTGAGACGCTAGTCATGGTTAGTAACTCTAAGGAAAATAGTGGAGATAATAACAATGGACGCCGTGGTCAAGTGGTTCATTCTTCGCCGGTGCCGCCGGAGAATAGGGTGCTTGACCCCAAGAAGTCTCAGAACATTGCTATTTTGCTTAGGGCGCTCAATGTAACTATTGATGAAGTTTGTGAAGCTCTCAGGGAAGGCAACTGTGATACCCTGGGAACAGAACTTCTAGAGAGTTTGTTGAAGATGGCTCCAACCAAAGAAGAAGAAACTAAGCTGAGGGAGTACCAAGACGAATCTCCCTTCAAGCTTGGCCCTGCCGAGAAATTTCTTAAGATCATGCTTGATATACCTTTTGCATTTAAGAGAGTGGAAGCTATGCTCTACATTGCTAATTTTGATTCTGAATTAGAATACCTTAAAAAGTCCTTTGAGACTCTGGAGGTGGCTTGTGAAGAATTGAGAAACAGCAGAATGTTTTTGAAGTTACTTGAAGCTGTTCTCAGAACTGGAAACCGAATGAATGTTGGCACGAATCGTGGCGATGCACATGCATTCAAGCTGGACACTCTTCTAAAGCTGGTTGATATTAAAGGAACTGATGGAAAGACCACTCTGTTGCATTTCGTTGTACAGGAAATTGTCAGAACTGAGGGATCTCATATTTCCGATTCTAACAATCAACAAGCCTCCGAGAACAACCAGGAATATACTCTTCAAGATGAGGTTGAATTCCGGAAGCTTGGACTGCAAGTTGTTTCGGGCTTGAGTGGGGAGCTCACTAATGTGAAAAAAACAGCTACAATGGACTCAGACATGCTTAGCAGCGATGTTGCTAAACTCGCTAGGGGAATCGAGAAAGTTGTGGAAGTTGTCAAACTGAATGAAGCATCACCTTTGAAAGACACTAGCCAAAAGTTTTCCGTGGCAATGAAATGTTTCTTGGAGAAAGGAGGAGAAGAAATTTTAAGAATCCAGAACCAAGAGAAAAAGGCTCTCTCTTCAGTAAAGGAGATAACTGAGTATTTCCATGGAAATTCAGCAAAGGAAGAAGCTCATCCTTTTAGAATTTTTATGGTAGTGAGGGATTTCCTTTCGATACTAGATGGTGTGTGCAAGGAAGTTGGGAAGGTGAACGAGAGGACTCTAGTTGGTTCTAGACAATCTGTAATGCCTGCAAACCCTGTAACGCCAGCAATTTTTCCTATTATTACTGGTAAGCAGCCATATGATTCATGTGAATCTGATTAA 2580 0.4876 MSHTTFTFLLCFLSLLLSSSFSRHLLHHPLFPAPSLPIPPTQPPSHSPQPQPQPQHHQPKLPFSSISSPSSPSSSSQPNNPFFFPTYPPSPPPPSPSVVATFPANISSLLLPHPTARHHRPALALALSLSLLSLALLSAAAAFALHRRNRTSSSFHADDHEDDDKASRQDSLRLFPRNAATSDGTHPKPRGGTGATSSPRTDYLYLGTVATSEPPDSSSSNTTGTLIAPPYRKLGDSPELKPLPPLPRHNLRPWLSEEEEEDKKEKHKEYQDEEEDEEFFSPRGSSGNKQQSPPSPVAVLGIGDSSPRSLEAFHLEKLRCTSFTSRTPSHSCSPHQNPVSASHSPSSFCSSPSSPKPIEEFRSSWDVPATKLPSPPPPPPPPPPPPPRFWETPVMNTLAPNESEETPKPKLKALHWDKVKASSDRATVWDRLRPSSFQLNEDMIETLVMVSNSKENSGDNNNGRRGQVVHSSPVPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKEEETKLREYQDESPFKLGPAEKFLKIMLDIPFAFKRVEAMLYIANFDSELEYLKKSFETLEVACEELRNSRMFLKLLEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISDSNNQQASENNQEYTLQDEVEFRKLGLQVVSGLSGELTNVKKTATMDSDMLSSDVAKLARGIEKVVEVVKLNEASPLKDTSQKFSVAMKCFLEKGGEEILRIQNQEKKALSSVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKEVGKVNERTLVGSRQSVMPANPVTPAIFPIITGKQPYDSCESD 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61021g00003 859 PANTHER FORMIN-RELATED 8 841 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 453 468 - -
Stsc61021g00003 859 Coils Coil 256 277 - -
Stsc61021g00003 859 SMART it6_source 401 826 IPR015425 -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 175 304 - -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 252 273 - -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 323 358 - -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 58 81 - -
Stsc61021g00003 859 SUPERFAMILY Formin homology 2 domain (FH2 domain) 377 824 - -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 191 227 - -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 36 89 - -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 36 57 - -
Stsc61021g00003 859 Pfam Formin Homology 2 Domain 403 811 IPR015425 -
Stsc61021g00003 859 Gene3D Formin, FH2 domain 407 835 IPR042201 -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 453 481 - -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 323 394 - -
Stsc61021g00003 859 MobiDBLite consensus disorder prediction 370 391 - -
Stsc61021g00003 859 ProSiteProfiles Formin homology-2 (FH2) domain profile. 401 837 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61021g00003 Stsc-Chr61021 8720 12800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61021g00003 391 851 FH2 protein (formin) Gene Family AT3G25500 66.237 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61021g00003 - - gmx:100786203 991.104