Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61019g00003 ATGGCGGAGTTTCTTGCAAGCTACAACATAATAGGTCCAAGTACAGTGTCATCATCCCATTCCCATCCTCATCATCAGGAATTATCATCAATGCTATCCTCTGGCAGCAGTATCAGTAGCAGTAGCATTACTACTAATAATCCTTCTCTAACCACCCCAACAATTCCAATACCAACATGTTTCATTGTTCCTCGTCAATCTGCTGCTACTCCCATTGCCCTGAATGAATCTGGTATTCCCCCCGCGGTGATGGACGGTTTCTTCACGGAGGAGGAGATAGTAAGAATGAAAGAGGCTGCATCTAAGGCCATGGACGAATTAGCCAGGCTTCTTCGCATGAACGAGCCTTTCTGGTATAGGTCAACTCTTAATAGCAGCTTCATTCTTCACCGTCAGAGCTACGACAGCACCTTCCACAGTGTTGGTTTGAGGTGTGAGGCACGCAGAGAGGCATCAAAAGATTTACGAGTTGTGGCCATGAATGGCCACAAATTGGTTGACATCTTCTTAGATTCGGGAAAATGGGTTTCTATGTTCCCAACAATTGTTAAAAGAGCAAAGACAATCCAAGTACTCAACAGCGGTTTGCCAGGCACCCGAAATGGAGCCTTGCAATTGATGCATGGAGAGATACACATTCTTCCGCCGTGTATTAGAGCTCGGGAATTCTTCTTTCTGCGATTCAATAATTCCCTCACTTGGAAGCTTCCTTCTGGATGCTTAATCCATGACATGAACAATGGCTACTCCACTGTTACTTGGGTGGAGCATGTGGAAGTAAGTGAACATATTGAAACGCATCCGGTTTTCAGAGACATAGTTTGTGGGAATGGTGGATTTGGAGCAGAAAGATGGATGTCAACACTGGAAAGAATGTGCGAGAGAATTGTATTCGCCTTAATGGACATAATGCCTAGTTGTGATATTGGAATGATTGCTTTACCTGAAGGAAGGAAGAATGTGATGGAACTTTCTGAGCGGATGGTGAAGGTATTTTGTAGGTATCTGGACATGACAGGTAACATGGAGTTGCAGTATGGGCAGTACCACCATAATGGTGTAAGGTTAGGTATTCGAGCAAGTCTAGAGCCTGGTCTGCCTAAGGGCATCATTCTCACTGCTTCTACCTCCCTTTGGCTTCCTCTCTTGCCTCAATCACTCTTTAACTTCCTCAAAGATCCATCAACTAGACCCATGTGGGATGTTCTATGCCATGGAAATCCAGTGGTTCAGATTCAGCGCATCTCAAATGGAACTTTCACAGATAACTTCACAACAATTATTCGGCGTAATGACTCGAGGGAGAACAAGAACACGATGGTACTCCAAGAATGCTGCACGGATTCCCTGGGAAGCGTGGTGGTGTATGCTCCGGTGAGTGATGACACATTAACTGCCACAATCAACGGAGAAGACACAACGGAGATTCCTATTCTGCCGTCGGGGTTCACCATATGCGGAGATGGATCTCCTCCGCGAGGACCTTGTGGGTGTGGCCCACAGGAAGCGAGGCATTACGGTGGGTCCGTGCTGACCATGGCGATACAGGTGCTTGTTTGTAACCAAGATGAGATGGGTCATCAGCTCAACATGGACATCGTTCATGCTGTCTATGGACTCGCTTGCACAACTCTCCATAACATTAAAGCTGCCATGATTTCTTCCTCATGA 1671 0.4614 MAEFLASYNIIGPSTVSSSHSHPHHQELSSMLSSGSSISSSSITTNNPSLTTPTIPIPTCFIVPRQSAATPIALNESGIPPAVMDGFFTEEEIVRMKEAASKAMDELARLLRMNEPFWYRSTLNSSFILHRQSYDSTFHSVGLRCEARREASKDLRVVAMNGHKLVDIFLDSGKWVSMFPTIVKRAKTIQVLNSGLPGTRNGALQLMHGEIHILPPCIRAREFFFLRFNNSLTWKLPSGCLIHDMNNGYSTVTWVEHVEVSEHIETHPVFRDIVCGNGGFGAERWMSTLERMCERIVFALMDIMPSCDIGMIALPEGRKNVMELSERMVKVFCRYLDMTGNMELQYGQYHHNGVRLGIRASLEPGLPKGIILTASTSLWLPLLPQSLFNFLKDPSTRPMWDVLCHGNPVVQIQRISNGTFTDNFTTIIRRNDSRENKNTMVLQECCTDSLGSVVVYAPVSDDTLTATINGEDTTEIPILPSGFTICGDGSPPRGPCGCGPQEARHYGGSVLTMAIQVLVCNQDEMGHQLNMDIVHAVYGLACTTLHNIKAAMISSS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61019g00003 556 SUPERFAMILY Bet v1-like 315 514 - -
Stsc61019g00003 556 Coils Coil 93 113 - -
Stsc61019g00003 556 CDD START_ArGLABRA2_like 94 294 - -
Stsc61019g00003 556 Pfam START domain 235 295 IPR002913 GO:0008289
Stsc61019g00003 556 Pfam START domain 100 228 IPR002913 GO:0008289
Stsc61019g00003 556 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 24 552 IPR042160 -
Stsc61019g00003 556 SUPERFAMILY Bet v1-like 90 295 - -
Stsc61019g00003 556 ProSiteProfiles START domain profile. 89 298 IPR002913 GO:0008289
Stsc61019g00003 556 MobiDBLite consensus disorder prediction 16 51 - -
Stsc61019g00003 556 SMART START_1 98 295 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61019g00003 Stsc-Chr61019 15982 18267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61019g00003 22 552 Homeobox Transcription Factor Family AT1G73360 36.071 2.96e-104 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61019g00003 K09338 - cave:132182686 417.542