Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61019g00002 ATGGCAACTTTGCAGTTTTTGTATTACTGCCTCCTTTCACTTGCTTTCTTTCTATTCATTCTCAGGAAGCTCTTCTTCAAAAACACAACCTTCTCGAACCTTCCACCTTCTCCTCCAACAATTCCGATCATCGGAAACCTCCACCACCTCAAGTCCCCACTCCACCGCTCCATCTATGCCCTATCACAAACCTACGGCCACATATTCTCCCTTTGGATTGGTTCACAGCTTGTTGTTGTTGTCTCCTCCCAAACCCTAGTGCAACAATGCTTCACCAAATACGACATCGTTTTAGCCAATAGAGCGCGCAATCTCGTCGGAAAGTACCTCTTTTACGACTGTACTAGTTTGGGCGCCTCCTCCTACGGCGACCACTGGCGGAACCTTCGCCGCATTGCCACCACCGACGTGCTCTCCACGCACCGCATCAACTCCTTTGTGGAAACACGAAAAGACGAAACCTTGAGGGTGATAAAGGATTTGGTTGAGGAAACGTGGACGGGGTTCACTAGGGTTAAATTGAGGCCATGGCTTTCCAAGATCTCGTTCAATAGCATGATGAGAATGATCTCCGGGAAGAGGTACTACGGGGACGGTGACGGCGATGACGTGGCAGATACCGAGGAAGCCAGGAAATTCAGGGAGACGATCGCGGAGATACTGTCGTTGATAGGTGCTAGCAAGGTGGTTGACTTTTTTCCGTTGCTACGGTGGTTTGACTTTGACGGTTTGGAGAAGAAGCTGAAGAGGGTTAACAAGAACGCTGATGAATTCTTGCAGGGTCTAATTGATGAGCACCGTAGTAATAATGGGGAGGAGCATAGCAAGAAAACCATGATTGGGAATCTCTTAACTCAGCAAAAATTGCAGCCTCAGTATTACTCTGATTGTGTCATCAAAGGCCTTATTCAGGATATGCTTCTTGGTGGAACGGACACAACAGCTGTGACAATGGAGTGGGCAATGGCTGCTCTATTAAATCATCCAGAGATATTCAAGAAAGCAAAGAATGAATTGGATACCATGGTAGGCAAAGATCGCTTGGTAGATGAATCAGACATTCCAAATCTTCCATACATTCAAAACATTATCTACGAGACACTTCGTTTGTACACTCCAGGCCCATTGCTATTGCCTCATGTATCTTCAGATGAGTTCAACATTGAAGGGTTCACAATTCCACGTGGCACTATAGTATTGACCAACGCATGGACCATTCATAGAGATCCTAAAGTTTGGGGTGATGATGCCGAATGCTTTAAGCCTGAAAGGTTTGAAAAAGACGGGGAAGCTAATAAGTTACTTGCGTTTGGATTGGGAAGGAGAGCTTGCCCTGGATTAGGGTTAGCATACCGTACAATGGTTTTAACTTTGGGATTATTGATTCAGTGCTTTGAATGGAAAACATTAAGAGATAATGAAGAAATTGATATGAGGGAGAATGAAGGAGCTGCCACACCAAAATTAATTCCATTGGAGGCCTTGTGTAAAGCACAACCAATCAGCACCATAATCAAGATATAA 1524 0.4508 MATLQFLYYCLLSLAFFLFILRKLFFKNTTFSNLPPSPPTIPIIGNLHHLKSPLHRSIYALSQTYGHIFSLWIGSQLVVVVSSQTLVQQCFTKYDIVLANRARNLVGKYLFYDCTSLGASSYGDHWRNLRRIATTDVLSTHRINSFVETRKDETLRVIKDLVEETWTGFTRVKLRPWLSKISFNSMMRMISGKRYYGDGDGDDVADTEEARKFRETIAEILSLIGASKVVDFFPLLRWFDFDGLEKKLKRVNKNADEFLQGLIDEHRSNNGEEHSKKTMIGNLLTQQKLQPQYYSDCVIKGLIQDMLLGGTDTTAVTMEWAMAALLNHPEIFKKAKNELDTMVGKDRLVDESDIPNLPYIQNIIYETLRLYTPGPLLLPHVSSDEFNIEGFTIPRGTIVLTNAWTIHRDPKVWGDDAECFKPERFEKDGEANKLLAFGLGRRACPGLGLAYRTMVLTLGLLIQCFEWKTLRDNEEIDMRENEGAATPKLIPLEALCKAQPISTIIKI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61019g00002 507 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 CDD CYP81 66 492 - -
Stsc61019g00002 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Stsc61019g00002 507 PANTHER CYTOCHROME P450 82C3-RELATED 13 498 - -
Stsc61019g00002 507 FunFam Cytochrome P450 family protein 25 502 - -
Stsc61019g00002 507 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 SUPERFAMILY Cytochrome P450 35 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00002 507 Gene3D Cytochrome P450 22 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61019g00002 Stsc-Chr61019 7392 9681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61019g00002 17 501 Cytochrome P450 AT4G37340 51.423 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61019g00002 K13260 K22932 gmx:100784120 644.039