Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61019g00001 ATGATATACAAGTACAACCCCTCATGCATATCTAGCTTCTCTAATATGGAAACTTTTTTGTATTACTCCCTTTTCACAATTATTATTGCCATTGCATTCATCATCATCACTCTCATCAACAGAACCACAACACTCAATAATAATAATAAGAAGCTTCCACCATGTCCACCAACACTTCCAATAATAGGAAACCTGCACCACTTGAGGCCCCGTCTCCACCGAACTCTACAAGCCCTTTCCCAAACCTACGGCCACATATTCTCCCTCTGGTTCGGTTCTCGCCTCGTAGTCGTCGTGTCCTGTCCAAACCTAGCCCAACAATGCCTTACCAAATACGACAGCGTTTTGGCCAACCGTCCTCGTTTTCTCACCGGAAAGTACCTCTTTTATAACCATACTAGCTTGGTCTTCTCTTCCAACAACAACCACTGGCGCAACCTTCGTCGCATAGCCACCATGGATGTCCTCTCAACGCCCCGCCTCAACTCCTTCTTCGAAACTCGAAGGGACGAGGTTATCAGGTTCGTAAGAAACCTAGTTGCGGACACCTCCATGGGGTTTGCTAGGGTGCAATTGAGGCCCAGGATAACGGAGATGTCACTCAACAATATGATGAGGATGGTCTCCGGAAAGAGGAATGAATATGGGGAAGACTGCAGGGATGACAATGGAGCAGGACGGTTCAGAGATATCATCATAGAGATCCTAGCTTTGGTGGATGCGAACAACAAGAGTGACTTCTTGCCTTTGCTTCGGTGGTTTGATTTTGATGGGTTTGTGAAGAAACTAAAGAGAGTTGGTGAAGAAGCTGATGTGTTTTGGCAAGGGCTCCTTCAAGAGCATCGCAATGAGGAGCATGGTAATAACGATACCATGATACAACATCTCTTGCTTCTTCAAAAATTGCAACCTACCTACTACACCGATCATATTATCAAAGGACTTATTCAGGATATGTTACTTGCTGGAACGAACACAACGGTTCTAACTATGGAGTGGACATTATCAGCTCTATTGAATCACCCAGAGATATTGAAGAAAGCAAAGGATGAAGTTGACAATCACATAGGCAAAGATCGTTTAGTTGATGAATCAGACATTCCGAATCTTCCCTATCTTCAAAATATTATTCATGAGACACTTCGATTATACTCTCCAAGTCCATTGTTACTGCCTCATTTTTCTTCAGGTGAGGTGAATATTGGAGGATTTACTATTCCACGTGACACTATAGTGTTAATTAATTCATGGGCTATGAGAAGAGATCCTAAAATTTGGGGTGATGATGTTGAATGTTTTAAGCCTGAAAGGTTTGAGAAGGAAGGGGAAGCAAACAAGTTAATGGCATTTGGATTGGGGAGAAGAGCTTGCCCTGGATATGGATTGGCAAATCGTATAATGGGTTTGACTTTGGGATTATTAATTCAATGTTTTGAATGGAAACGAATGAATGATGAAGAAATTGATATGAGGGAGGACAAAGGTTTCACCTTTGCGAAACTAATTCCATTAGAGGCTATGTGCGAGGCAAGACCAATCAGCAAGAAATTAGTTAAACATGCAATATAA 1569 0.4226 MIYKYNPSCISSFSNMETFLYYSLFTIIIAIAFIIITLINRTTTLNNNNKKLPPCPPTLPIIGNLHHLRPRLHRTLQALSQTYGHIFSLWFGSRLVVVVSCPNLAQQCLTKYDSVLANRPRFLTGKYLFYNHTSLVFSSNNNHWRNLRRIATMDVLSTPRLNSFFETRRDEVIRFVRNLVADTSMGFARVQLRPRITEMSLNNMMRMVSGKRNEYGEDCRDDNGAGRFRDIIIEILALVDANNKSDFLPLLRWFDFDGFVKKLKRVGEEADVFWQGLLQEHRNEEHGNNDTMIQHLLLLQKLQPTYYTDHIIKGLIQDMLLAGTNTTVLTMEWTLSALLNHPEILKKAKDEVDNHIGKDRLVDESDIPNLPYLQNIIHETLRLYSPSPLLLPHFSSGEVNIGGFTIPRDTIVLINSWAMRRDPKIWGDDVECFKPERFEKEGEANKLMAFGLGRRACPGYGLANRIMGLTLGLLIQCFEWKRMNDEEIDMREDKGFTFAKLIPLEAMCEARPISKKLVKHAI 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61019g00001 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Stsc61019g00001 522 FunFam Cytochrome P450 family protein 44 514 - -
Stsc61019g00001 522 CDD CYP81 84 504 - -
Stsc61019g00001 522 PANTHER CYTOCHROME P450 82C3-RELATED 30 511 - -
Stsc61019g00001 522 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 Gene3D Cytochrome P450 37 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 Pfam Cytochrome P450 53 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61019g00001 522 SUPERFAMILY Cytochrome P450 53 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61019g00001 Stsc-Chr61019 779 2512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61019g00001 17 521 Cytochrome P450 AT4G37340 48.527 5.86e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61019g00001 K13260 K22932 gmx:100784120 637.876