Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61014g00006 ATGGCACTAATTGCATCTATTCTAATGCAATTGCCATATGAGTTTAACTCAACCCTTTACCTTTCAATAGTAGTTGGCATCATTAGCATCCTTCTGGTGCTTAATCTCACAAGAAGAAGCAAATCCATTAACCTTCCACCATCACCACCAAAGCTACCTTTCATTGGAAACCTTCACCAAGTAGGAACATTGCCACACAGTTCTTTCAAAGAACTCTCCAATAAACACGGTCCTCTCATGTTTCTTCAGTTAGGGCAAATCCCAACAGTAGTGATTTCGTCCGCAGATGTAGCTAAAGAAATCATCAGAAATCATGATATTGTTTTCTCAAACAGACCTCAAACTACAGCCGCAAATATCTTTCTCTATGGTTGCAAAGACATAGGGTTTGCACCCTACGGCGAAGAGTGGAGACAGAAAAGAAAAGTTTGTGTTCTTGAGCTTCTAAGTCTCAAAAGAGTTAAATCCTTTCTTCCTATAAGAAAACAAGAGGTTGAAGAACTTGTTACTACCATTCGGAAAGCATGTTCAAGAGAAGGTTCTTCTTTATCATCACCATCTCGTGTGATAAATCTTAGTGACTTGATGATTGCTACATCAAACAACATAGTTTCAAGATGCGTTCTCGGACAAAAGTACGATCTTCCGGATGGTAGTGACCATGCAAGCTTTGGAGATCTTGGAAGGAAGTTGATGGGGAAACTCACTCAATTTTGTGTTGGTGATTTCTTCCCTTCATTGGGTTGGATTGATGTTGTTAGAGGTTTGATTTCTGAGATTAATGCCATTTTTGTAGAATTAGATTCTTTCTTGAACGGGGTAGTTGAAGAACACAAGAAAAAGAAAAAGAATAATATTGATGATGATAATAGTAACAAAGACTTTGTGGATATACTTCTTCATCTTCAGGAGAAGGGTATGCTTGACTTTGAGCTCACTCAAGCTGATCTAAAAGCAATTTTAACGGATATGTTTGTTGGAGGGAGCGATACCACCTCAACTACATTAGAATGGACTTTTGCTGAACTCCTTAGAAAGCCAAAAACCATGAAGAAACTTCAAGAAGAGATAAGGAGAATTGTGGGGAACAAATCAAAGCTAGATGAAAATGATATAAATCAAATGAATTATTTGAAGTGTGTAATCAAAGAATCTCTTAGGCTACACCCACCTCTTCCTGTTATACTCCCCAGACAAACAACATCAAATTCAAAAATAAAAGGGTATGATATTCCTTCGAAAACAACTGTTTATTTAAATGTTTGGGCAATTCAAAGGGACCCTGAATTATGGGAGAATCCTGAAGAATTCATCCCTGAAAGATTTGAAAGTGTTCAAATTGATTTTAAAGGGCAAGATTTTCAGTTAATGCCATTTGGTACTGGAAGAAGAGGTTGTATTGGAATTTCATTTGGACTTGCTTCTACTGAAATTATTCTCGCTAATCTTTTATATTGGTTTGATTGGAAGCTACCTTCTGAAAATGGTGATAAAATAATGCAAAACATTGACATGAGTGAAATGTCTGGGATCACTGTTGGCAAGAAAGTTCCACTTCTTCTTCGACCCATACCATATTCTCATTGA 1587 0.3699 MALIASILMQLPYEFNSTLYLSIVVGIISILLVLNLTRRSKSINLPPSPPKLPFIGNLHQVGTLPHSSFKELSNKHGPLMFLQLGQIPTVVISSADVAKEIIRNHDIVFSNRPQTTAANIFLYGCKDIGFAPYGEEWRQKRKVCVLELLSLKRVKSFLPIRKQEVEELVTTIRKACSREGSSLSSPSRVINLSDLMIATSNNIVSRCVLGQKYDLPDGSDHASFGDLGRKLMGKLTQFCVGDFFPSLGWIDVVRGLISEINAIFVELDSFLNGVVEEHKKKKKNNIDDDNSNKDFVDILLHLQEKGMLDFELTQADLKAILTDMFVGGSDTTSTTLEWTFAELLRKPKTMKKLQEEIRRIVGNKSKLDENDINQMNYLKCVIKESLRLHPPLPVILPRQTTSNSKIKGYDIPSKTTVYLNVWAIQRDPELWENPEEFIPERFESVQIDFKGQDFQLMPFGTGRRGCIGISFGLASTEIILANLLYWFDWKLPSENGDKIMQNIDMSEMSGITVGKKVPLLLRPIPYSH 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61014g00006 528 CDD CYP71-like 75 519 - -
Stsc61014g00006 528 FunFam Cytochrome P450 83B1 32 522 - -
Stsc61014g00006 528 SUPERFAMILY Cytochrome P450 46 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 Pfam Cytochrome P450 46 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00006 528 PANTHER CYTOCHROME P450 71B11-RELATED 34 524 - -
Stsc61014g00006 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Stsc61014g00006 528 Coils Coil 350 370 - -
Stsc61014g00006 528 Gene3D Cytochrome P450 32 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61014g00006 Stsc-Chr61014 31192 34135 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61014g00006 38 519 Cytochrome P450 AT3G48310 41.615 1.73e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61014g00006 K20617 - gmx:100792382 656.366