Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61014g00001 ATGAAGAAAGCCCAAGAAGAGGTAAGGAAAGTTGTGGGAAGAAAATCAAAGGTGGAAGAGAATGATGTGAATCAAATGAATTATTTGAATTGTGTGATCAAAGAAACTCTGAGATTGCATCCACCAGTTCCTCTTTTAATCCCTCGACAAACAACGTCAAGCGTGAAACTGAAAAGTTTCGATATTCCTTTAAAAACAAAAGTGTTTATAAATGCATGGGCGATTCAAAAAGATCCCGAATTGTGGGAGGATCCTGAAGAGTTCATTCCGGAGAGATTTGAAAAGAACCAAGTTGATGTAAGAGGATTAGATTTCAAATTAATACCATTTGGTATTGGAAGAAGAGGATGTCCTGGAATTTCATTTGGACTTGTTTCTACTGAATATGTTCTTGCTAATCTTCTATATTGGTTTGATTGGAAGCTGCATGGTCAAGATGCATGTAGCATAGACATGAGTGAAATGTGTGGACTCACTAGTGATTGCGTCCTACTAAGCTCGGACACAGGCCAATTCAGCAAAGCAAATTGCTTGCCTACTGACCTTGCTTATTGCTTATCTTTTCCATTGGCCAAGCTTGAACTAGCGAGTTAG 594 0.3855 MKKAQEEVRKVVGRKSKVEENDVNQMNYLNCVIKETLRLHPPVPLLIPRQTTSSVKLKSFDIPLKTKVFINAWAIQKDPELWEDPEEFIPERFEKNQVDVRGLDFKLIPFGIGRRGCPGISFGLVSTEYVLANLLYWFDWKLHGQDACSIDMSEMCGLTSDCVLLSSDTGQFSKANCLPTDLAYCLSFPLAKLELAS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61014g00001 197 PANTHER CYTOCHROME P450 71B11-RELATED 1 159 - -
Stsc61014g00001 197 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00001 197 PRINTS E-class P450 group I signature 117 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00001 197 PRINTS E-class P450 group I signature 71 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00001 197 PRINTS E-class P450 group I signature 107 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00001 197 Coils Coil 1 21 - -
Stsc61014g00001 197 SUPERFAMILY Cytochrome P450 1 159 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00001 197 Pfam Cytochrome P450 1 158 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc61014g00001 197 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 110 119 IPR017972 GO:0005506|GO:0016705
Stsc61014g00001 197 Gene3D Cytochrome P450 1 160 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61014g00001 Stsc-Chr61014 3850 5328 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61014g00001 1 154 Cytochrome P450 AT3G26210 52.564 8.20e-57 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61014g00001 K20617 - gmx:606503 243.047