Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61012g00002 ATGGCGGCTCGAGCCCACGACGTGGCAGCTCTTGCCATCAAAGGCCGCTCTGCTGTCCTTAACTTCCCCGAACTCGCCCCGCACCTTCCTCGTCCCGCCACCACTTCCCCGAAGGACATACAAGCCGCCGCCGCCAAAGCAGCCACATTCGATAACCATGCAACGGATAAAGCCGAGCCCGATCTCAGCCGAGCCGAGTCTCCCTCGTCTTCCTCCCTCTCTCCTCAGAATCAAGAATCGCCGAATTCAAATTCATCGTCATTAGACGACGATGATGACACGTTCAAGAACCTCTCTGACCTGGTAGTTGACTTGAATGACAGGAGTGGAGGAAGTAAATTTGGTTACTCGACGCCATGGCTTATAGCTGGAGCCGAAAATCTCGACTCTGCTTTCCGGCTGGAAGACCATTTCCCATCATGGGTCTCAGAGTCCTACTAA 441 0.5442 MAARAHDVAALAIKGRSAVLNFPELAPHLPRPATTSPKDIQAAAAKAATFDNHATDKAEPDLSRAESPSSSSLSPQNQESPNSNSSSLDDDDDTFKNLSDLVVDLNDRSGGSKFGYSTPWLIAGAENLDSAFRLEDHFPSWVSESY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61012g00002 146 ProSiteProfiles AP2/ERF domain profile. 1 23 IPR001471 GO:0003700|GO:0006355
Stsc61012g00002 146 MobiDBLite consensus disorder prediction 64 88 - -
Stsc61012g00002 146 MobiDBLite consensus disorder prediction 26 93 - -
Stsc61012g00002 146 Gene3D AP2/ERF domain 1 24 IPR036955 GO:0003700|GO:0006355
Stsc61012g00002 146 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61012g00002 Stsc-Chr61012 9392 9891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61012g00002 1 138 AP2-EREBP Transcription Factor Family AT2G44940 40.123 2.52e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61012g00002 - - ahf:112747744 131.724