Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61006g00005 ATGCCTAAGGTCCGAAAGATTTTGGACACTTCAGATCCGAGTCAACCAAATCCTCAACTTGGGGGTCAGAGAGGGCGCAAGTTCGGAAACTCGCTCGGAACGTTGGGCTTGATCTTCTCCGTCACGGAGAGTGCGATTCAATCGTTCACCGACAGAGATAACATGGTTAACAGCGTCACCGCTAGGCTTGTCATTGGAGCTTTGTATAAGGCGGCGGCGGGGCCAAGATCTGTGGCGATAGCGGGAGTCCTTGGTGGGATCGCGGCAGCGGTTACCGTGGCCGGGAAGCAGGCTCTGAGGAGATATGTTCCGATATAG 318 0.5472 MPKVRKILDTSDPSQPNPQLGGQRGRKFGNSLGTLGLIFSVTESAIQSFTDRDNMVNSVTARLVIGALYKAAAGPRSVAIAGVLGGIAAAVTVAGKQALRRYVPI 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61006g00005 105 MobiDBLite consensus disorder prediction 1 25 - -
Stsc61006g00005 105 Pfam Tim17/Tim22/Tim23/Pmp24 family 22 87 - -
Stsc61006g00005 105 PANTHER TIM23 22 92 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61006g00005 Stsc-Chr61006 27008 28091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61006g00005 3 105 Chloroplast and Mitochondria Gene Families AT1G72750 47.573 7.03e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61006g00005 K17794 - qsa:O6P43_011195 100.138