Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc61001g00004 ATGAGAAGGTTCACGTGGTTTGCGCCGTATCGCCGCCGTGTGCTCTCTTCTTTCCCCTCTTCAGAACCCGTCGTCCGTAGAGAACAGTACTTCACCGAATTATTGCCTTTACGCCAATCGCAATTGCTCAATCGAGCTTTGTTCAATCGCAGTTATGTCCCGAAATCGGAGGAGTTTCTGAGTTTGAGTAAACCGTTGATATATCGATATATTCATGCTGCAGCATTTTCGACATCGGTTGAGCAGGATTATTATCAAGTTCTTGGCATTTCTAAAAACGCCACTCAGGATGAGATAAAGAAGGCGTTTCTGTTGCTTGCTAAAAAGTACCATCCAGATGCAAATAAGAATAATCCATCTGCAAAGAGGAAATTTCAAGATATAAGAGAAGCTTATGAGACATTGAGAGATTCTAAAAAGAGGGCCCAGTATGACAAGATGAAGATGCAAAGTCGTGGTTCGCAGAACATAGAATATGATGATGATGATGATGATGATGATGATGATGATTCTGCAGAAAGGTTTCGAAATGGTTTTCATGATTTTTCTTCTTCATTTCATACAGTATTTTCTGAGATATTTGAAGAAGAATTTAGTCATTCTTCAAGTATAGAGGTGGAGTTGTCCCTTAATTTCTCAGAAGCTGCAAGAGGGTGCACTAAACATGTGTCATTTGATGCACTCGTTCCATGTGACTATTGCGATGGCAGAGGGTATCCACCACGTGCGAAGGCTAAAGTATGTCCAACATGCCGGGGCTTAGGTCGGTTATCAGTTGTGACATAA 786 0.4135 MRRFTWFAPYRRRVLSSFPSSEPVVRREQYFTELLPLRQSQLLNRALFNRSYVPKSEEFLSLSKPLIYRYIHAAAFSTSVEQDYYQVLGISKNATQDEIKKAFLLLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSKKRAQYDKMKMQSRGSQNIEYDDDDDDDDDDDSAERFRNGFHDFSSSFHTVFSEIFEEEFSHSSSIEVELSLNFSEAARGCTKHVSFDALVPCDYCDGRGYPPRAKAKVCPTCRGLGRLSVVT 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc61001g00004 261 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 218 258 IPR036410 -
Stsc61001g00004 261 Gene3D - 204 230 - -
Stsc61001g00004 261 PRINTS DnaJ domain signature 103 118 IPR001623 -
Stsc61001g00004 261 PRINTS DnaJ domain signature 120 140 IPR001623 -
Stsc61001g00004 261 PRINTS DnaJ domain signature 85 103 IPR001623 -
Stsc61001g00004 261 PRINTS DnaJ domain signature 140 159 IPR001623 -
Stsc61001g00004 261 Gene3D DnaJ domain 79 203 IPR036869 -
Stsc61001g00004 261 SMART dnaj_3 82 140 IPR001623 -
Stsc61001g00004 261 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Stsc61001g00004 261 ProSiteProfiles dnaJ domain profile. 83 148 IPR001623 -
Stsc61001g00004 261 SUPERFAMILY Chaperone J-domain 82 151 IPR036869 -
Stsc61001g00004 261 Pfam DnaJ domain 83 145 IPR001623 -
Stsc61001g00004 261 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 49 256 - -
Stsc61001g00004 261 Gene3D - 231 256 - -
Stsc61001g00004 261 MobiDBLite consensus disorder prediction 143 174 - -
Stsc61001g00004 261 CDD DnaJ 83 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc61001g00004 Stsc-Chr61001 29548 32672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc61001g00004 74 150 C2H2 Transcription Factor Family AT1G74250 40.244 7.30e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc61001g00004 - - aip:107622493 409.068